Xanthomonas campestris pv. campestris ATCC 33913: XCC0623
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Entry
XCC0623 CDS
T00083
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00521
Streptomycin biosynthesis
xcc00523
Polyketide sugar unit biosynthesis
xcc00541
O-Antigen nucleotide sugar biosynthesis
xcc01100
Metabolic pathways
xcc01110
Biosynthesis of secondary metabolites
xcc01250
Biosynthesis of nucleotide sugars
Module
xcc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XCC0623 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XCC0623 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XCC0623 (rmlC)
Enzymes [BR:
xcc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XCC0623 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AAM39939
UniProt:
H9L4N6
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All DBs
Position
745628..746185
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AA seq
185 aa
AA seq
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MKVIETTLPGCVVIEPAVFGDERGQFFETWNAERFGQHGLPTSFVQSNVSTSARGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRAGSPHFGRWTAVLLSAENRRQVWIPEGFAHGFA
VLSEKALFSYLCTDVYVKEADAGVRWDDAAIGIDWPVSDPSLSAKDAKAPFLDEVPVDRL
PVYRP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtgatcgaaacgacgttgcccggctgcgtcgtcatcgagcctgcggtcttcggt
gatgagcgcggtcagttcttcgaaacatggaatgcggagcgctttgggcagcacggcctg
ccgacgagttttgtgcaaagtaacgtctccacgtccgccaggggcgtgctacgtggtctg
cactatcagtggcctcgaccgcagggcaaattggtgagcgtgcttgaaggcgaggtgtac
gatgtcgcggtggatatccgcgctgggtctccccacttcgggcgttggaccgctgtttta
ctgagcgcagaaaatcgacgccaagtctggatacctgaaggctttgcacatggtttcgca
gtactttcagagaaagcattgttcagctatctgtgcaccgatgtgtacgtcaaggaagcc
gatgctggcgtgcgttgggacgatgcggcgatcgggatcgattggccggtcagcgatccg
tcgctgtccgccaaggatgccaaggcgccgttcctggatgaggtgccagtcgatcgtttg
ccggtgtataggccgtga
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