Xanthomonas campestris pv. campestris ATCC 33913: XCC1077
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Entry
XCC1077 CDS
T00083
Symbol
srfJ
Name
(GenBank) glycosyl hydrolase
KO
K01201
glucosylceramidase [EC:
3.2.1.45
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00511
Other glycan degradation
xcc00600
Sphingolipid metabolism
xcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
XCC1077 (srfJ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XCC1077 (srfJ)
Enzymes [BR:
xcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
XCC1077 (srfJ)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_30
Glyco_hydro_30C
Motif
Other DBs
NCBI-ProteinID:
AAM40376
UniProt:
Q8PBP2
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All DBs
Position
1241992..1243638
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AA seq
548 aa
AA seq
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MLRRVGRLGLVTNLGGCTVKRAIAWSMVGVLGVWGAATETVLASASASATATATATATAT
PIPVPVSTASASTPASKAVEAAVADAAVPPAAPAGALRVYTSAQGATQQMRVSTVDVPTA
GHALTEKENSIFVNPQRRFQALLGIGGAITDSSAETFAKLPKQAQRQLLTAYYDPDKGIG
YTLARTTIHSSDFSSGSYTYIKEGDAALKTFSVQHDAKYRIPMLRQAIAAAGGTLTTFAS
PWSAPAFMKDSNAMLKGGKLLPEYAQAWATYYTRFIAAYEKAGIPIWGISLQNEPMAVQT
WESMLFSAEEERDFLKNHLGPTMAKAGYGDRKIIVWDHNRDMMVHRAHVIFDDPEASKYA
WGMGFHWYETWAGFAPMVENVAAVAQAYPDKHLLLTEAAVEKFDPAKLQHWPNGERYGTA
IINDLNHGAVGWTDWNILLDEHGGPNHVGNYCFAPVHANTRTGEVIYTPSYWYIGHFSKF
IRPGAQRVSAASSRSNLATTAFVNSDGSLATVVMNATDVAIRYNLYVGDASSVLEIPAHA
IQTVVLAQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccgcgttggtcggttaggcttggtcaccaacctgggagggtgcacggtgaag
cgagcgattgcgtggtcgatggtgggggttctgggagtttggggtgctgcgactgaaacg
gtgttggcatctgcttctgcatctgcaacagcaacagcaacagcaacagcaacagcaacg
cctattccggtgccggtatcgacggcatctgcatccacgcccgcatcgaaggcggtagag
gctgcggttgcggatgctgctgttccgccagcagcacctgccggcgcactacgcgtttac
acctctgcccaaggcgcaacgcagcagatgcgtgtcagcactgtcgatgtgcccacggca
gggcatgcgttgaccgagaaagagaattccatcttcgtcaatccacagcggcggtttcag
gcgttgctgggcattggcggggcgatcaccgattccagcgcggaaaccttcgccaaactg
cccaagcaggcgcagcggcaactgctcaccgcctactacgacccggacaagggcatcggc
tacacgctggcgcggaccaccatccatagctcggatttcagcagtggcagctacacctat
atcaaggaaggcgacgcggcgctgaagaccttttcggtgcagcacgatgcgaaataccgc
attccgatgctgcgccaggccattgctgcggccggtggcacgctcaccacgtttgccagc
ccgtggagcgcgccggccttcatgaaagacagcaacgccatgctcaagggcggcaagctg
ttgcccgaatatgcgcaggcctgggccacgtactacacgcgcttcattgccgcgtatgaa
aaggccggcatcccgatctggggcatcagcctgcagaacgagccgatggcagtgcagacc
tgggagtcgatgctgttttctgcggaagaagagcgcgactttctcaagaatcatctgggc
cccaccatggccaaggccggctatggcgatcgcaagatcatcgtgtgggaccataaccgc
gacatgatggtgcaccgcgcgcatgtgatcttcgatgatccggaggcttccaaatatgcg
tggggcatgggcttccactggtacgaaacctgggccgggttcgcgccgatggtggagaac
gtggcggcggtggcacaggcgtacccggacaagcacctgctgctcaccgaagcggcggtg
gaaaagttcgacccggccaagctgcagcactggcccaatggcgagcgctatggcacggcc
atcatcaacgacctcaatcacggtgcggtgggttggacggactggaacatcctgctggac
gagcacggtggccccaatcacgtgggcaactattgctttgcaccggtgcatgccaacacg
cgcaccggcgaggtgatctacacgccgagctattggtatatcggccacttttccaagttc
atccggcctggcgcgcagcgggtgagtgcggcgagcagccgcagtaacctggctaccact
gcgttcgtcaacagcgatggcagcctggcgacggtggtgatgaatgccacggatgtggcg
atccgctacaacctgtatgtgggcgatgcctccagcgtgctggagattcccgcgcatgcg
atccagacggtggtgctggcgcagtga
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