Xanthomonas citri subsp. citri UI6: J158_03490
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Entry
J158_03490 CDS
T03894
Name
(GenBank) Cation/multidrug efflux pump
KO
K18138
multidrug efflux pump
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj01501
beta-Lactam resistance
xcj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J158_03490
01503 Cationic antimicrobial peptide (CAMP) resistance
J158_03490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcj02000
]
J158_03490
01504 Antimicrobial resistance genes [BR:
xcj01504
]
J158_03490
Transporters [BR:
xcj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J158_03490
Antimicrobial resistance genes [BR:
xcj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J158_03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
AJY87857
LinkDB
All DBs
Position
complement(3891065..3894190)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLSDLSITRPVMAVVMSLLLIVLGVMSFTRLTLRELPAIDPPIVSVDVEYTGASAAVVE
SRITQVLEDALAGIEGISTIEARSRNGSSDISIEFVQSRDVEAAANDVRDAVSRVSDRMP
DQARPPEISKVEADADPILWLNMSSSTMDTLQLSDYAERYVVDRFSSLDGVAQVRIGGRQ
RYAMRIWLDRDQLAARELTVADVEAALQNENVELPAGSIESAQRDFTLRVERSYLKPEDF
AKLPLNKGEGGYVVRLGDVARVELTSAERRAYFQSNGVPNVGLGIVRNSTANALDVAREA
RAQAEEVQKSLPKGTNIFVAFDTTTFIDAAVERVYHTLVEAVVLVLVVIWVFLGSARAAL
IPAVTVPVCLIAAFIALYAFDFSINLLTLLALVLCIGLVVDDAIVVVENIQRRIDLGEPP
LVAAKRGTGQVAFAVIATTAVLVAVFLPVGFLEGNTGRLFRELAVALAAAVAISAFVALT
LTPMMSSKLLRAHGQAKPNRFHHWFDGRMQAVSGAYGRSLERHVHRTWIFALLMLLALGA
SAWLMGRIPSELAPAEDRGNFQIMIDGPEGAGFDYTVGQMHQVEDILRPYVGPDKPIVRA
NPRVPGGFGSSEEMHTGRVSVFLQDWEKRTRPTTEVADEVQQKLNVLSGVRARTQVSGGL
VRSRGQPFQLVLGGPDYAEIAQWRDRILQRMEANPGLVGPDSDYKETRPQMRVNIDRLRA
ADLGVPVTAIGGALEALMGSRRVTTFVDNGEEYDVMLQAGREGRMSPEDLTAIRVRSNRG
ELIPLSNLVTLSEVAEAGTLNRFNRLRAITITAGLAPGYPLGDAIAWAQQAAQEELPEYA
QVDWKGESREYQQSGSAVLLTFGMALLVVYLVLAAQFESFAHPLVIMLTVPLAVLGALVG
LWLTGGTLNLFSQIGIVMLVGLAAKNGILIVEFANQLRDEGRSVHAAIVESASVRLRPIL
MTSIATVVGAIPLVVAGGPGSASRATIGVVVIFGVSLSTLLSLYVVPAFYSLIAPFTKSP
EAVARQLETLEAQTPSVGGHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctccgacctgtcgatcacccgcccggtgatggcggtggtgatgagtttgctg
ctgatcgtgttgggggtgatgtcgttcacccgccttacgctgcgcgaattgccggccatc
gatccgcccatcgtgtcggtggatgtggaatacaccggcgcctcggcggcagtggtggaa
agccgcatcacccaggtgctggaagacgcgctggccggcatcgagggcatctccaccatc
gaggcgcgcagccgcaatggctcgtccgatatcagcatcgaattcgtgcaatcgcgcgat
gtggaggcggccgccaacgatgtgcgcgacgcggtcagccgcgtgtccgaccgcatgccc
gaccaggcgcgcccaccggagatttccaaggtcgaagccgacgccgaccccatcctgtgg
ctcaacatgagctccagcacgatggacacgctgcagctgtccgactacgccgagcgctac
gtggtggatcgtttttccagcctggacggcgtggcgcaggtacggatcggcgggcgccag
cgctatgcgatgcgcatctggctggaccgcgaccagctggccgcacgcgagctcaccgtg
gccgatgtggaagcggcgctgcaaaatgaaaacgtggagttgccggccggcagcatcgaa
tcggcgcagcgcgatttcaccttgcgcgtggagcgcagttatctcaagcccgaagacttc
gccaagttgccgttgaacaagggcgagggcggttacgtggtacggctgggcgatgtggcc
agggtggagctgacctcggccgagcggcgcgcctatttccagagcaatggcgtgcccaac
gtggggctgggcatcgtgcgcaactccaccgccaatgcgctggacgtggcgcgcgaagcg
cgcgcgcaagccgaagaagtgcagaagtcgctaccgaagggcaccaacatcttcgttgcc
ttcgataccaccaccttcatcgatgcggcggtggagcgcgtgtatcacacgctggtggaa
gcggtggtgctggtgctggtggtgatctgggtgtttctgggcagcgcgcgcgccgcgctg
attcctgcggtgacggtgccggtgtgtttgattgccgcgttcattgcgctatacgccttc
gatttttcgatcaacctgctcaccctgctggccttggtgttgtgtatcggcttggtggtg
gacgacgccatcgtggtggtggaaaacatccagcgccggatcgatctgggcgaaccgccg
ctggtagccgccaagcgcggcaccgggcaggtggcgttcgccgtgattgcgaccacggcc
gtgctggtggcggtgtttctgccggtcggttttctggaaggcaataccgggcggctgttc
cgcgagttggcggtggcgctggcggcggcagtggcgatctcggccttcgtggcgctgacg
ctgacgccgatgatgtcgtccaagttgttgcgcgcgcatgggcaggccaagcccaatcgc
ttccaccactggttcgatgggcgcatgcaggcggtgtccggtgcgtatgggcgctcgctg
gagcggcatgtgcaccgcacctggatctttgcgctgctgatgctgttggcgctgggcgcc
agcgcatggctgatgggccgcattccctccgaactggcgccggccgaagaccgcggcaat
ttccagatcatgatcgacggaccggaaggtgccggcttcgattacacggtggggcagatg
catcaggtggaagacatcctgcgcccctacgtggggccggacaaacccatcgtgcgcgcc
aacccgcgcgtgcccggtggctttggcagcagcgaggaaatgcacaccggccgggtcagc
gtgttcttgcaggattgggaaaagcgcacccgcccgaccaccgaagtggccgatgaggtg
cagcagaaactcaacgtgctcagcggcgtgcgtgcgcgcacgcaggtgagcggcgggttg
gtgcgtagccgcggccagccgtttcagttggtgctgggcgggccggattacgcggagatc
gcgcagtggcgcgatcgcatcctgcagcgcatggaagccaaccccggcttggtcggcccg
gactcggattacaaggaaacccgcccgcagatgcgcgtcaatatcgaccgcctgcgcgca
gccgatctgggcgtgccggtcactgccatcggcggcgcgctggaagcgctgatgggctcg
cgccgcgtcaccaccttcgtcgacaacggcgaggaatacgacgtgatgctgcaggctggg
cgcgagggccgcatgtcgccggaagacctcactgccattcgcgtgcgttccaaccgtggc
gagctgatcccgctctccaacctggtgaccttgagcgaagtggccgaagccggcaccttg
aaccgcttcaatcgcctgcgcgcgatcacgatcaccgccggcctggcgccgggttatccg
cttggcgatgccattgcctgggcgcagcaggccgcgcaggaagagcttcccgaatatgcg
caggtggactggaaaggcgagtcgcgcgagtaccagcaatcgggcagtgcggtgttgctg
accttcggcatggcgctgctggtggtgtatctggtgctggccgcgcagttcgaaagcttc
gcgcacccgttggtgatcatgctgacggtgccattggcggtgctgggcgcgctggtgggg
ctgtggctgaccggcggcacgctcaacctgttcagtcagatcggcatcgtgatgctggtg
ggcctggcggccaagaacggcatcctgatcgtggaattcgccaaccagttgcgcgatgag
gggcgcagtgtgcatgcggccatcgtggaatcggcatcggtgcgtttgcgcccgatcctg
atgacctcgattgcgacggtggtcggcgcgattccgctggtggtggccggcggacccggc
tcggccagccgcgccaccatcggcgttgtggtgatcttcggcgtctcgctgtccacgttg
ttgtcgctgtacgtggtgccggcgttctatagcctgatcgcgccgtttaccaagtcgccc
gaagcggtggcacgccagctggaaaccctggaagcgcagacgccgtcggtgggtgggcat
gcgtga
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