Xanthomonas citri subsp. citri UI6: J158_03744
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Entry
J158_03744 CDS
T03894
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj00521
Streptomycin biosynthesis
xcj00523
Polyketide sugar unit biosynthesis
xcj00541
O-Antigen nucleotide sugar biosynthesis
xcj01100
Metabolic pathways
xcj01110
Biosynthesis of secondary metabolites
xcj01250
Biosynthesis of nucleotide sugars
Module
xcj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
J158_03744
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J158_03744
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J158_03744
Enzymes [BR:
xcj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
J158_03744
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AJY88109
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All DBs
Position
complement(4225351..4225908)
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AA seq
185 aa
AA seq
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MKIVETRLPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTKFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISNPLLSAKDSAAPFLGDVPAERL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgtcgaaacccgtttaccaggttgtgtggtcatcgagccggcagtgttcggc
gatgagcgcggatatttctttgaaacgtggaatgcggagcgcttcggccagcatggtctg
ccgacgaaattcgtgcaaagcaacgtgtccacgtcggccaagggcgtgctgcgcggtttg
cattaccagtggccgcgtccccagggcaagctggtcagcgtgcttgagggtgaggtctac
gatgtggctgtcgatgtccgccatggctcgcccaacttcgggcaatgggcagccgtggtg
ttgagcgcggaaaacaaaaagcaattctggattccagaaggatttgcgcacggctttgca
gtgctgtcggagcgagcagtgttcagctacctatgcaccgacgtttacgtgaaggaggcc
gatgccggcgtgcgctgggatgatgcggcaattggcatcgattggccgatcagcaacccg
ttgttgtctgcaaaggactccgccgcgccgttcctgggcgatgtgccggccgaacgcctg
ccggtgtatacgccatga
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