Xiphophorus couchianus (Monterrey platyfish): 114144172
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Entry
114144172 CDS
T05908
Symbol
colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00310
Lysine degradation
xco00514
Other types of O-glycan biosynthesis
xco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
114144172 (colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
114144172 (colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xco01003
]
114144172 (colgalt1)
Enzymes [BR:
xco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
114144172 (colgalt1)
Glycosyltransferases [BR:
xco01003
]
O-Glycan biosynthesis
O-linked Gal type
114144172 (colgalt1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
114144172
NCBI-ProteinID:
XP_027872509
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Position
5:complement(31075251..31095011)
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AA seq
609 aa
AA seq
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MLRVTSLLLALLFVLLPGSGWSYFPEERWSPESPLLAPRVVIALVCRNSAHSLPLFLGAV
ERLNYPKDRLALWVATDHNIDNTTAILRDWLIVVQNYYHYVEWRPDDENSAFEDEVGPKH
WNNLRYEHVMKLRQAALDTAREIWADYLLMADCDNLLTDRDVLWKLMRENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRRRERRGCFAVPMVHSTYLVDLRKEASSQLAFYP
PHPEYSWALDDVIIFAYSARMADVQMYVCNRDTYGYFPVPMRSHATMQDEMESFLHTHLE
IMVNNPPLEPSSFLSLPPKHPNKMGFDEVFMINLVRRADRRERMLRTLYEQEISCKVVAA
VDGKALNTSDIDSMGIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIAERGLQTTLVL
EDDLRFEVFFKRRLQALLQEVTTHKLDWDLIYIGRKRMQVDHPEKSVPNVHNLVEADYSY
WTLGYMLSLQGAQKLLMAEPLSKMLPVDEFLPVMFDKHPISEYMEPFERRDLRAFSAEPL
LVYPTHYTGEAGYVSDTETSVVWDNETVKTDWDRAKSRKTQEQGELSFKAQNSDVLQSEL
ENVSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggtcacctcactgctgctcgccctgctgttcgttctgttgccgggctcgggc
tggtcttatttcccggaggagcgctggagccccgagtcgccgctcctggctcccagggtc
gtcatcgcgctggtctgccgcaactcggcccactctctgccgctgttcctcggagccgtc
gagcggctgaactacccgaaggaccgcctagcgctctgggtggcgacagatcacaacata
gacaacaccacagcgatcctaagagactggctcatcgtggtgcagaattactaccattat
gtggagtggcgacctgatgacgaaaacagtgcctttgaggacgaagtggggccaaaacac
tggaataatctccgatatgaacacgtgatgaaacttcggcaggcagcgctggacaccgcc
cgcgagatctgggccgactatctcctgatggccgactgtgacaacctgctcactgacaga
gatgtgttgtggaagctgatgagggaaaacaaaaccatcgtcgcccccatgctggagtcc
agagccgcttactccaacttctggtgcgggatgacgtcacagggttattacaagcgcacc
ccggcctacatgcccattcgccgccgggagcgccggggctgtttcgctgtgccgatggtc
cactccacctatctggtggatctgaggaaagaagcctccagtcagctggctttctacccg
ccacacccggagtacagctgggcgctggacgacgtcattatctttgcttactctgctcgc
atggcagacgtgcagatgtatgtgtgcaacagagacacctacgggtatttcccggtgccc
atgcgttcccacgctaccatgcaggatgaaatggaaagctttttgcacactcaccttgag
atcatggtgaataatcctccattggagccctccagcttcctgtctcttcctcccaagcat
ccaaacaagatgggctttgatgaggtcttcatgataaatctggttcgtcgagccgaccgc
cgcgagcgaatgctgagaactttgtacgagcaggagatcagctgtaaggtcgttgctgct
gtggatggcaaagctctgaatacgtctgacatagattccatggggattaaaatgctcccg
ggatacaaagacccttatcacggtcggcccctcaccaagggcgagctgggttgtttcctc
tctcattacaacatctggaaggagatcgcggagcgcggcctccagacgaccctggtgctg
gaggacgacctccgcttcgaggtgttcttcaaacgccggctccaggcactgctgcaggaa
gtgaccacacacaaactggactgggatcttatatacatcggacggaagcggatgcaggtg
gaccaccccgagaagtccgtcccgaatgtccacaacctggtggaggccgactactcctac
tggacgctcggctacatgttgtctctgcagggagcccagaagctcctcatggccgagccc
ctgagcaagatgctccccgtcgacgaattcctcccagtcatgttcgacaagcaccccatt
tcggagtacatggaacccttcgagcggcgggacctgcgggcgttttccgccgagccgctg
ctggtgtacccgacccactacacgggggaggcgggctacgtcagcgacacggagacgtcc
gtggtgtgggacaacgagaccgtcaagacggactgggaccgggccaagtcgaggaagacg
caggagcagggcgagctgagcttcaaggcgcagaattcggacgtgctgcagtccgagctg
gagaacgtgagcgcacgggacgagctgtga
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