Xiphophorus couchianus (Monterrey platyfish): 114147039
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Entry
114147039 CDS
T05908
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114147039 (smc5)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
114147039 (smc5)
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GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_29
AAA_13
AAA_16
GCN5L1
Motif
Other DBs
NCBI-GeneID:
114147039
NCBI-ProteinID:
XP_027877375
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All DBs
Position
1:complement(13961729..13972822)
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AA seq
1073 aa
AA seq
DB search
MAEPSKRQRLSLVSSGSQTVSASSSRGPEGAGEAGSFVEGSILRITMKSFLTYDYSVVRP
GPNLNMIVGANGTGKSSIVCAICLVLAGRTVTLGRGDKVGLYVKRGCQKGFVEIELFKNG
GNLVISREIHVENNQSLWMINGGISNQKKVEEEVKALQIQVSNLCQFLPQEKVGEFAKMS
KIELLEATEKSVGPPEMYEYHCELKNFRNKERELENVVKEKASFLEKAKQRNERNKIDVN
RYYEKKRHLDVIELLEKKKPWVEYETARKELEGLKMEREEAKKQLSALRQAQAPMLKKIQ
QIDDQLKPNESQMKAKTAAIKEASVKCKQKQDQLDRKHKEIDDIKQNLRLKQTEEEDHQK
RINNTRLTIEDLKSELAKISDQPDVTPQINAVNMELRRIQVERAKIEGERADLRREGDNI
SAESKMLVRKLKDMNNIMNAKEEKLRGRHKDTHAALQWLRKNRELFEGNVHEPMMLVVNV
KNPEFAKYVESHISFHDLRAFVFQRKDDMEKFMTEVRDKMNLKVNSISAPPESCSKRAPS
RNIESLRRFGFFTYLREMFDAPDEVMSYLCFQYKVHDVPVGNEQTKALIKTVIEEPYLRV
LYTTDERYNVKRSFYSNKISTSNSALHASQYLSITVDAEEKRQVEQQMKACESRLREIDE
QKKALEKEAAALDRKENELLSEKKRLSELKGKRRQLEQKISTKQDSLKQMEQNVVDLKKV
EEETKEKIKAVNFLKVTIATAIVAQMKLRAKLTMEKVHLALEMAGLTAEKNKLENDCRDS
ASEFKTMEQRCSRLELRKLQLTEQCKGLLKRAKSNCRMQPDEALSEDLRHAFSKLPDTLD
EVDAMLNEERSRAECFTGLSESVVEEYNRREQEIKHLEKELQNKTDSLNAYRQNISEAKE
RWLNPLKQLVEQINDKFSDFFRSMECAGEVDLHSENEEEYDKYGIRIRVKFHSSTQLHEL
TPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTACKETT
SQYFFITPKLLQNLQYAEEMTILCIHNGPHMLPPNEWDTAAFILRRCQRKARA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccagtaaaagacagcggcttagcctcgtctccagcggctcacaaacggtt
tctgcgagctcatccaggggccccgaaggagcaggagaggctggctccttcgtggagggc
tccatacttcgcatcacgatgaaaagcttcctgacatacgactactctgtggtgcgtcct
gggccgaatctgaacatgattgttggagccaacggaaccggaaagtccagcattgtgtgc
gccatatgcctggttctggctggccggactgtaactctgggcagaggagacaaggttggg
ctttatgtgaaacgtggctgtcaaaaaggttttgttgagatagagctgtttaaaaatgga
ggtaatttggtaattagccgagagatccatgtggagaacaatcagtcgctgtggatgata
aatggtggaatcagcaaccagaaaaaagtggaggaggaggtgaaagctctccagatccaa
gtcagcaacctctgccagtttctacctcaggaaaaagttggagagtttgcaaagatgtcc
aaaattgaacttctcgaggcaactgagaagtcagttgggccaccagaaatgtacgagtac
cactgcgagctcaaaaacttccgcaacaaagagcgagaactggagaatgttgtgaaggag
aaggcgagcttcctagaaaaggccaagcagaggaacgagaggaacaagatcgacgtaaac
cgttattacgaaaagaaaaggcacctggatgtcattgagttgctagaaaagaagaagccg
tgggtggagtatgagaccgcacgtaaggagctggagggcttgaagatggagcgggaagag
gccaaaaagcagctgtctgccctgaggcaggcgcaggcgcccatgttgaagaagatccag
cagattgacgaccagctgaagcccaacgagtcgcaaatgaaggccaagactgcagcaatc
aaagaggcctctgtgaagtgcaaacagaaacaagatcagctggatcggaaacacaaagag
atcgacgacattaaacagaacctgcgactgaagcagaccgaagaggaggaccaccagaag
cggatcaataacaccagactgaccatcgaggacctgaagtcggagctggccaaaatcagt
gaccagccggacgtgacaccacagatcaacgccgtcaacatggagctgaggcgcatccag
gtggagagagcaaagatcgaaggagagagggcggacctgcgcagggagggcgacaacatc
agcgccgagtcgaaaatgttggtaaggaagcttaaggacatgaacaacataatgaacgcc
aaagaagagaagctgcgaggacgccacaaggatacacacgctgccctccagtggctgagg
aagaaccgagagctctttgaaggaaatgtccatgaacccatgatgctggtggtgaatgta
aagaatcccgaatttgccaagtatgtggagagccacatctccttccacgacctgcgggcg
ttcgttttccagaggaaggacgacatggagaagtttatgaccgaggtccgtgacaaaatg
aacttgaaagttaactccatttctgctccaccggagtcgtgttccaagcgggcgccatcc
cgaaacatcgagtccctgagacgttttggcttcttcacttacctccgtgagatgtttgat
gctcctgatgaggtgatgagttacctttgcttccagtacaaggtgcacgatgtgccagtg
ggaaacgagcagaccaaagctctcatcaaaacggtgattgaggagccctaccttagggtg
ttatacacaacagatgagaggtacaatgtaaaaaggtccttctattccaacaagataagt
accagcaactcggctttgcacgcctctcagtacctctcaataaccgtggatgctgaggag
aaacggcaagtggagcagcagatgaaggcctgtgagtcaagattgcgagagattgatgag
caaaagaaggccctggaaaaggaggctgccgctctggatcgcaaagaaaacgaactgtta
tcagagaagaagcgtctctctgagctaaaggggaagaggagacaactggaacagaaaatc
agcacaaaacaggacagtctgaagcagatggagcagaatgttgtcgatctgaaaaaagtt
gaagaggaaactaaagaaaaaattaaggctgtcaatttcctgaaggtcaccatagctaca
gcaatcgtggctcaaatgaagctgagagccaagctgacgatggagaaggtgcatctggct
ttggagatggcggggttaacagcagagaagaacaagctggaaaacgactgcagagacagt
gcctctgaatttaaaaccatggaacaaagatgcagccgtctggagctgaggaagctccag
ctgactgaacagtgcaaaggcctgctgaagagggcgaagtccaactgtcggatgcagcca
gacgaggcattatcagaagacctgcgccatgctttcagcaaactgcctgacacgctggat
gaggtcgatgccatgctgaacgaggaacgctccagagccgagtgcttcactggtctcagt
gaaagcgttgttgaggagtacaacaggagagagcaggagatcaaacatctggagaaagag
cttcaaaataagacagactccttgaatgcctacaggcagaatatatctgaggcgaaggaa
cgctggctgaaccctctgaagcaactggtggaacagataaatgacaagttcagtgacttc
ttccgctccatggagtgtgcaggagaggtggatttgcactcagagaatgaggaggaatac
gacaagtacgggattcgcattcgtgtgaagttccacagcagcacgcagcttcacgagctc
acgccgcaccatcagagcggaggagagcgcagcgtctccaccatgctttatctgatggcc
ttgcaggagctgaaccgctgccccttcagagtggtggatgagatcaaccagggaatggat
cctgtaaatgaaaggagagtgtttgacattgtggtccggaccgcctgcaaagagacgacg
tctcagtacttcttcatcacgccaaaactgctgcagaatcttcagtacgccgaggagatg
accattctctgcatccataacgggcctcacatgcttcctcccaatgaatgggacacagcg
gctttcatcctacgccgctgccaaagaaaagccagggcataa
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