Xiphophorus couchianus (Monterrey platyfish): 114147603
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Entry
114147603 CDS
T05908
Symbol
ddx3x
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114147603 (ddx3x)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114147603 (ddx3x)
03041 Spliceosome [BR:
xco03041
]
114147603 (ddx3x)
03036 Chromosome and associated proteins [BR:
xco03036
]
114147603 (ddx3x)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114147603 (ddx3x)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114147603 (ddx3x)
mRNA cycle factors
Common to processing body (P body) and stress granule
114147603 (ddx3x)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114147603 (ddx3x)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114147603 (ddx3x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
114147603
NCBI-ProteinID:
XP_027877889
LinkDB
All DBs
Position
7:complement(4263101..4278922)
Genome browser
AA seq
775 aa
AA seq
DB search
MSHVVVDNPHGLDQQLAALDLNPDGQGGGTGRRYIPPHLRNKDAAKNAGNSYPAGKQCGY
SVAPVNFYAPKQCPQPWQADCQPMQGASCPSVWDDCTMGYPRLASQELAFYHAYGGGWRN
RCDSPGWDGGRTNGFVNGFHDNRTNGGFGGRGPPRNDRGGRGAYRGNRGGGSFNQPLQNT
GFGGYENKDGGWGGAPRDAAYNSFGGRNDRSKSAFFNDRGAGSRGRYERGGFGGGGNSRW
VEDSRGEDDWSKPTAPNERLENELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVD
MGEIIMGNITLTRYTRPTPVQKHAIPIIKIKRDLMACAQTGSGKTAAFLLPVLSQIYTEG
PGDALQASKSSGQENGRYGRRKQYPISLVLAPTRELALQIYDEAKKFAYRSHVRPCVVYG
GADIGQQIRELERGCHLLVATPGRLVDMMERGKIGLDHCNYLVLDEADRMLDMGFEPQIR
RIVEQDTMPPKGVRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWV
EENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREE
ALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT
SFFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQHKSTSRGRSKRFSGGFGARDYRQ
ASGGSGGFNSNRSGRSAGGHGGSRGFGGGGFGGNFYNDGYGGNYNHSSSVDWWGN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgttgataatccacacggtctagatcagcagcttgctgccctagac
ttgaaccctgacggtcaaggcggaggaactggcagacgctacattccacctcacctgagg
aacaaagatgctgcaaaaaatgcaggaaattcttatcccgctggtaaacagtgcggttat
tcagtggcaccagtaaatttctacgcccctaagcagtgcccccaaccatggcaggctgac
tgccagccaatgcagggagctagctgtccttcagtatgggatgactgtactatgggttac
ccaagactggcctctcaagagcttgccttttaccatgcctacggtggcggctggcgaaac
cgatgcgattcacctggatgggacggaggacgcaccaacggatttgtgaatggtttccat
gacaaccgtacaaatgggggttttggagggcgcggaccccctcgcaatgatagaggtggg
cgtggcgcctaccgtggtaacaggggcggaggctcgtttaatcagccattgcaaaataca
ggttttggaggctacgaaaacaaagacggaggctggggaggagctcctagagacgccgcc
tacaacagctttggagggcgcaacgatcggtccaagtctgcgttcttcaacgaccgtggg
gctggctccagaggaagatatgagcgcggggggttcggtggtggtgggaacagccgctgg
gtggaggactccagaggagaagatgactggtccaagcctacggcacccaatgagcgtctg
gaaaacgagcttttctctggaagcaacacggggataaactttgagaaatacgacgatatt
cccgtggaggcgactggaagcaactgcccaccacacattgagagttttcatgatgtggac
atgggggagatcatcatggggaacatcaccctgacccgctacacccgaccaactccggtc
cagaagcacgccattcccatcattaagattaagagagacctgatggcctgcgcccagacg
ggttctggtaaaaccgctgctttcctgttgccggttctgagtcagatctacacagaaggg
ccaggagatgcactgcaagcctcaaagagcagtggacaggagaatggacggtacggccgt
cgtaagcagtaccccatctccctcgttctggctcctaccagagaactggctctgcagatc
tacgatgaggccaagaagttcgcctaccgctcccatgtacgtccctgtgtggtgtacggc
ggcgccgacatcggccaacagatccgggaactggaaagaggctgccatctactggtagcc
acaccgggacgtctggtggacatgatggagagaggcaagatcggtctggaccattgcaac
tacctggttctggacgaggctgaccgcatgttggacatgggctttgagccgcagatcaga
cgcatcgtggagcaggacacaatgccgcccaagggcgtccgccagaccatgatgttcagc
gccaccttccccaaagagattcagatccttgctcgtgacttcctggaggactacatcttc
ctggcagtggggcgcgtcggttccacatcagagaacatcacacaaaaggttgtctgggta
gaagagaacgacaagaggtctttccttctggatctgctcaatgccacaggtaaagactcc
ctgaccctggtgtttgtggaaacaaagaaaggagctgatgctctggaagacttcctgtac
cgcgagggctacgcctgcaccagcatccatggagacagatctcagagggacagagaggaa
gctctgcaccagttccgctctggacgctgcccaatcctggtggctactgctgtggctgct
cgaggtctggacatcagcaacgtgaagcacgtgattaactttgatctgcccagcgacatt
gaggaatacgttcaccgtatcggccgtacgggacgtgtgggcaacctcggtctggccacg
tcgttctttaacgacaaaaacagcaacataaccaaagatttgctggacatcctggttgag
gccaagcaggaggttccttcctggctggagagcctggcctacgagcaccagcacaagagc
accagccgcggacgttccaagaggttctctggtggtttcggagccagagactaccgccag
gcatcgggaggctctggaggcttcaacagcaaccgctcaggacgcagcgctggcggtcac
ggaggaagccgtggctttggtggaggtggcttcggcggcaacttctacaacgacggctac
ggcggaaattacaaccactctagtagcgtagattggtgggggaactaa
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