Xiphophorus couchianus (Monterrey platyfish): 114148641
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Entry
114148641 CDS
T05908
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114148641
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114148641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
zf-RING_10
Prok-RING_4
zf-RING_6
MRP-S31
zf-RING_11
Gp58
Motif
Other DBs
NCBI-GeneID:
114148641
NCBI-ProteinID:
XP_027879848
LinkDB
All DBs
Position
7:27477288..27479369
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AA seq
560 aa
AA seq
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MEQNQLDPETFSCSICLDLLKDPVAIPCGHSYCMKCIKTQWDEEDQKGNHSCPQCRETFT
PRPVLKKNTMLAALVEQLKKTGLQAAAAAAADADHCNAGPEDVACDFCTGRKLKAIKSCL
FCLVSYCKNHLQPHLDVPGMKKHKLVEPTKNLQENICSRHDEVMKMFCRTDQKCVCLICL
MEEHKGHDTVSAATERTERQRELEERRGNIQQRIQDREEDVKLLQQEVEAISRSADKTVE
DSEKIFTQLIRLLQKRSSEVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLS
HTEDHNQFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNI
SLMVTEVDVLLSEPEPKTRAEFLKYACEITLDPNTANTWLVLSEGNRKVRSMKDRQSYSN
HPDRFTDKSQVLSRESLTGRCYWEVEWKGFVSVSVAYKNISRAGSGNECEFGYNDKSWAL
HCKHSKFGHNNIWTSISGPVSSRLGVYLDHTAGLLSFYSVSETMTLLHRVQTTFTQPLLA
GVRVWNYFAYGSSAEFIKLN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctggacccagaaactttctcctgctccatctgtctggatctactg
aaggatccggtggcgattccctgtggacacagctactgtatgaagtgtattaaaacccag
tgggatgaagaggatcagaagggaaaccacagctgccctcagtgcagggagacattcaca
ccgaggcctgtgctaaagaagaacaccatgctagcagctctagtggagcagctgaagaag
actggactccaagctgctgctgctgctgctgctgatgctgatcactgcaatgctggacct
gaagatgtggcctgtgatttctgcacaggaagaaaactgaaagccatcaagtcctgttta
ttctgtctggtttcctactgtaagaatcacctccaacctcaccttgatgttcctggaatg
aagaaacacaagctggtggagccgaccaagaacctgcaggagaacatctgctctcgtcat
gatgaggtgatgaagatgttctgtcgtactgatcagaagtgcgtctgtctcatctgttta
atggaggaacataaaggtcatgacacagtgtcagctgcaacagaaaggactgagaggcag
agagagctggaggagagacgaggaaacatccagcagagaatccaggacagagaggaagat
gtgaagctgcttcaacaggaggtggaggccatcagtcgctctgctgataaaacagtggag
gacagtgagaagatcttcacccagctgatccgtctcctccagaaaagaagctctgaggtg
aagcagcagatcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggag
aagctggagcaggagatcactgagctgaagaggaaagacgctgagctggagcagctctca
cacacagaggatcacaaccagtttctcctcaactacccctcactgccagcactcagtgag
tctacacactcatccagcatcaacatccgtcctctgagacactttgaggacgtgacagca
gctgtgtcagagctcagagagaaactacaggacgtcctgagagactcatggacaaacatc
tcactgatggtcactgaggtggatgttctgctgtcagaaccagaaccaaagaccagagct
gagttcttgaaatatgcatgtgaaattacactggatccaaacacagcaaacacatggctg
gttctatcagagggaaacaggaaggtgagatcgatgaaagatcgtcagtcttattctaat
catccagacagattcactgataaatcccaagttctgagtagagagagtctgactggacgt
tgttactgggaggtggagtggaaagggtttgtttctgtatcagtcgcatacaagaatatc
agcagagcaggaagtggcaatgaatgtgaatttggatataatgacaaatcttgggcttta
cattgtaaacattctaaatttggtcacaacaacatctggacctccatctcaggtccagtt
tcctccagactaggagtttacctggatcacacagcaggtcttctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctactggct
ggagttagggtgtggaattattttgcgtatggatcctctgcagagttcattaaactcaac
tag
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integrated database retrieval system
