Xiphophorus couchianus (Monterrey platyfish): 114150381
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Entry
114150381 CDS
T05908
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114150381 (ddx10)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114150381 (ddx10)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
90S particles
Helicases
114150381 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
114150381
NCBI-ProteinID:
XP_027882557
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All DBs
Position
9:1031077..1035604
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AA seq
810 aa
AA seq
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MKEKNKSSSRKKPKTAQIRRSADPVKCFEKWKNKYMKGRDRVKQRRMQSKKPEWQLEREY
IKSLVSRYGDINTTDVCRFSDFPISKKTLLGLQEAQYRQPTEIQRQTIGSALRGRDVLGA
AKTGSGKTLAFLVPVLECLYRQQWSSMDGLGVLIISPTRELAYQTFEVLRKVGKNHEFSA
GLVIGGKDLKSESERISGTNIVICTPGRLLQHMDETASFHASSLHMLVLDEADRILDMGF
ADTLNAIVDNLPKSRQTLLFSATQTRSVKDLARLSLKDPEFVWVHEKAKFSTPATLEQSY
VVCELHHKVNMLYSFIRSHLKKKIIVFFACCKEVQYLFRAFCRLRPGTPILALHGKQQQM
KRVEVYNNFVKKQSAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEG
GEALLLLLPSEEKAMLAQLQEKKAPINQIQVNPEKVHSVQQKLEAFLAQEMEQKERAQRC
FVSYLRSVYLMKNKQVFDIFQLPIRQYAQSLGLAVCPRVRFLSKAHAQKAENEDEEQSDE
EEELQSFKVQLSNKMPCEVVEHDTEENVDESSKALHGDISEDEDDLRDLELLTVKRKDVF
ELSGHPECVEDTSQGPNNTRKETKFKKTKKLLKRKFQINTKITFNEEGEAVQLWPPVQQT
VTAEDEEDNVLGINVAKARDRLRREDQEFDKQEYRRKVQAEHRNKRLKAKEARREASKQQ
RRSDEENVAYLACHSGGEFDSSILPDPDQLHSSEEEEEGYAKQEHICNEEPLAVTRKKGK
QLNDEHTGLDTGLSLAEDEELVLHLLRGPK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaaacaagagttccagtagaaagaaaccaaaaaccgctcagataagaagg
agcgccgatccagtaaaatgcttcgagaagtggaagaacaagtacatgaaggggagagac
cgtgtgaaacaaaggagaatgcagagcaaaaaacccgagtggcaactagaaagggagtac
atcaaaagtctggtgagcagatatggtgacataaacacgacggacgtttgtaggttttcg
gactttccgatctcgaagaagaccttgttgggtctacaggaggctcagtatcgccagccc
acagaaatccagagacaaacgattggctccgctctgcgtggcagagatgtccttggtgct
gcgaagactggttccggaaaaactttagccttcctcgttccggtgctggaatgtctgtat
cgtcagcagtggagctcaatggacggcctcggtgtcctcatcatatcaccaaccagagaa
ctcgcctatcaaaccttcgaagttctccgcaaagtaggcaaaaatcacgagttttccgca
gggctcgtcatcgggggtaaggaccttaagagcgagtcagagcggatatccggcaccaac
attgtgatatgcaccccggggcggctgctgcaacacatggacgagacagcctccttccat
gctagcagcttgcacatgcttgtcctcgacgaggcggatcgcatcctcgacatgggcttt
gcagacacgctcaatgccatagtggataacctgcccaagtcacgacagaccctgctgttt
tccgccacacagaccaggagtgtgaaagatctggcccgtcttagtctcaaggatccagag
tttgtgtgggttcacgagaaagccaagttcagcacgccggccaccttggagcagagctac
gtggtgtgtgagttgcaccacaaagtgaacatgctgtattcctttattagaagccacctg
aagaagaagattattgtgttctttgcctgttgcaaagaggttcagtatctgtttcgagcc
ttctgtcgtctaagacctgggactcccatcctggcgctgcatggaaagcagcagcaaatg
aagagggtggaggtctacaacaattttgtcaaaaagcagagtgcagtcctatttgccact
gatattgctgctagaggcctggacttccctgctgtcaattgggtgctgcagtttgactgt
ccagaggacgcagacacctacatccacagggtaggccgcacagctaggtacaaggagggt
ggagaagctctgctgctcttgctcccctctgaagagaaagccatgctggcccagctgcag
gagaagaaggctcccatcaatcagatccaagtgaatccagaaaaagtgcacagtgtgcag
cagaagctggaggccttcctggcccaggagatggagcagaaagaaagagcccagaggtgt
tttgtttcttacctgcgctcagtctatctcatgaaaaacaaacaagtctttgacatcttt
cagctgccgattaggcagtatgctcagtctctgggccttgctgtttgccctagggtgcgc
ttcctcagtaaagcccatgcacagaaagcagagaatgaggatgaggagcagtctgatgaa
gaggaagaactccagagctttaaggttcagctgagtaacaagatgccctgtgaagttgtt
gaacacgacacagaagaaaatgtggacgagtcctcaaaagcacttcatggtgacattagt
gaagatgaagatgatcttcgggacttagaactgctgactgtcaaaagaaaggatgtcttt
gagctgtcggggcacccagagtgtgtggaggacacttcccaaggcccaaataacaccaga
aaagaaacaaagtttaaaaagacaaaaaagctcttaaagagaaaattccaaatcaatacc
aaaattacttttaatgaagaaggagaagctgtgcagctttggcccccagtgcagcaaaca
gtaactgctgaggatgaggaagacaatgttttaggcatcaatgtggcaaaggccagagac
aggcttagacgtgaagaccaggagtttgacaagcaagagtacagacgcaaggttcaagct
gaacacagaaataagaggctcaaggccaaagaggccaggagggaggcaagtaagcagcaa
cggaggtctgatgaggaaaatgtagcatacttggcctgtcacagcgggggcgagtttgac
tccagcatcttaccagatcccgatcagttgcactcatcagaagaagaggaggagggttat
gctaaacaagaacacatctgcaacgaggagcctttagcggtgacaagaaagaaaggaaag
cagctgaatgatgagcatactggcctggacactggcctttcactggctgaagatgaagag
ctggttttacatctgctgcgtggaccaaagtag
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