Xiphophorus couchianus (Monterrey platyfish): 114150632
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Entry
114150632 CDS
T05908
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114150632 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114150632 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114150632 (usp13)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114150632 (usp13)
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114150632 (usp13)
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114150632 (usp13)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114150632 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
114150632
NCBI-ProteinID:
XP_027882995
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All DBs
Position
9:11424385..11457472
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AA seq
863 aa
AA seq
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MAADLGELLVPFMPTIRVPKTGDRVYKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKTTGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQELESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETSYPLAVK
LDTITPDGADVYSFEEEEAVLDPHMSEHLSHFGVDMLQMQRRTENGHHTDNNPRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLSTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNGHQQRGISPRMLKALV
SRGHPEFSSNRQQDGHEFFLHLINLVERNSAGSENPSDSFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYEARRKEAEENTRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVMQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLMPPIVLPEDTRDNSMSSTDSPEIDEGAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPLPSTSNSPMGATPLDNLPPEESI
AILTSMGFPRNHSIRALKATNNNLERALDWIFSHPEEEESDGLSDMADTEPNDNAFSNMN
SHSDSTLSPDRETSGPRVKDGPGRYELFAIISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtccccttcatgcccaccatcagagtccccaaa
acaggagacagagtctacaagagcgagtgcgccttctccttcgactcccccgagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgggaacatgtggagagg
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgacatgttaaagagaaa
accacaggtgctgccggaggtgccatccccagacgaagaaatggaaaagtgtttctagat
ttagagctaaaccgagattttaacggagaggactatgagtatgaggatgaggcaaagctc
gtcatttttccagaccacttcgagatccctttaccaaatattgaggagttgcctgctctg
gtgaccatagcctgtgatgcagtacttaacgcaccttcagcttacaagaaacaggagctt
gagtcttgggaggaggagatccaggtgtcaagacatgccagaagcctcagacagctggat
aatggagtccggatcccacccagtggctggaagtgtcagaaatgcgagatgagagagaac
ctgtggctgaacctgactgacggctcggttctttgtgggaagtggttctttgatgggagt
gggggcaacggtcacgctctggagcactacagagagaccagctacccactggctgttaaa
ctggacaccatcactccagacggagcagatgtttattcgtttgaggaggaagaggctgtt
ttggacccccacatgtcagagcacttgtcacactttggggtagacatgctccagatgcag
aggagaacagaaaatggacaccacacagacaataacccccgaccgcgagtcagtgagtgg
gaagtgatccaagagtcgggcatgaagctgaaggcggtgtttggttctggttacacaggc
atcaaaaacctgggaaacagctgctacctcagcacagtgctacaggtcctgttcagcatc
ccagatttccagaggatgtatgtaggtaaccttcagaggatatttgactattcgcccctg
gaccccacccaggatttcgccacacagatggctaaactgggacacgggctcctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaacgggcaccaacagaggggaatctctccccgaatgctcaaggcactggtc
agcagggggcacccagagttttcctccaacagacaacaagatggccatgagttcttcctg
caccttatcaacttggtggaaagaaacagtgctggttcagagaatccaagcgactcgttt
cgtttcttggtggaggagagagttcagtgctgtcagactcggcgggttcgttacactcag
cgggtcgactactgcatccagctaccggctcccatagaagcagcgacaaacagagaggag
ttgcttgcatatgaggccaggcggaaagaagccgaggagaacacgcgtgcccctcctgaa
ccggtgcgagcacggatccctttcacagcctgtcttcaggcctttacagagcctgaaaac
gtccccgatttctggagttcagcgttacaggccaaatcagctggagtcaaaacttcccgc
tttgcctcgttcccagagtatcttgttatgcagatcaagaaattcaccttcggtgttgac
tgggtgccaaagaagcttgacctggccatcgatgttccagacttcttggacctgagccgg
ctccgagccacagggctgcaggcgggcgaagaggagcttccggatctcatgcctcccatt
gttttaccggaagacaccagagataactccatgagctcaaccgactctccagagatagac
gaaggcgccgttatgcagctggcagagatgggttttccactggaggcctgcaggaaggct
gtgtactacacaggaaacatgggcccagagatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgaacctctcactttgccctcaatgatggatcctcttccctct
accagtaacagccccatgggggcgacgccactggacaacttgcctcccgaggagagcatc
gccatcctcacctcgatgggctttcctcgcaatcacagcatccgcgctctcaaagccacg
aataataatcttgagcgagcgctcgactggatcttctcccacccagaggaggaggagagc
gacgggctctctgacatggcggacacggagcccaacgacaacgccttttccaacatgaac
tcgcacagcgactccacgctgtccccagacagagaaacgtccggcccgagagtcaaagat
ggaccaggacgatatgagctgtttgccatcatcagccacatgggagcctccacaatgtct
ggacattatgtttgtcacatcaaaaaagagggaaggtgggtgatctacaacgaccacaaa
gtgtgtttgtcagaaaggcctccaaaggacttgggctacatctacttttaccgtcgcctc
tcgagcagttaa
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