Xiphophorus couchianus (Monterrey platyfish): 114152237
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Entry
114152237 CDS
T05908
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114152237
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114152237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
BshC
Motif
Other DBs
NCBI-GeneID:
114152237
NCBI-ProteinID:
XP_027885864
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Position
10:complement(7414601..7420991)
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AA seq
647 aa
AA seq
DB search
MFRGWGENQAGRDMAEPAAVEAAPAPKQQNLCDVCSGEVSECKPTACGHSVCVSCQGDKT
KGCSKCIQSTAVKPAPDNGPKQNGTAAASPEKTKKEQSQDPKTVEEVKVQGELMESEDPK
ASVEGETKPEPQTDQGPEPEEAKEEPLGPNDVVCDSCIETPCRALKSCLTCMVSYCEAHL
RPHLENPKFQNHRLVEPLRDIERRTCESHKWPLELFCCADSCCICQDCLKEEHRGHKTVP
VEEARRQIEKELREKQTQMVKVVTAGDNAINKLQDNRVSIEQSVTKVRSVIESQFQELQV
MVEMAKKEVTEILAAEESQALKQADGIQVHLEQRCTELKKAQAQTEKLSKNKNDVDFLQE
YAEWKKEATDNSLSGIYVGLEDRLDSFSQVIQESTSNLCDMLVSTYIQKVKEKCNNDEIG
IKITVQTNTAAKHDVSKPDPQTRTDFLQYAAQVSFDANTAHKFLRLTEENKKVTNTTPWQ
HPYPDVPERFENHRQVLAAESFYVGRHYFEADLSGEGTHVGVTYKSIDRKGDESSSCITG
NKFSWCLQWNGRTYSAWHSDEETPLNVERFTRIGVYVDYSQGLLSFYGVDNTMTLLHQYQ
AQFLEPLYPAFFLPKKENIVVLVAPGEPLPLKSPSPPTSPEHGPFVS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagggtggggagagaaccaggcaggaagagacatggcagaaccagcagcggtg
gaagcagctcctgctcccaaacagcagaacctgtgcgacgtctgctcaggtgaagtgagc
gaatgtaagcccacagcttgtggtcactccgtctgcgtttcctgtcaaggagacaaaact
aaaggatgttcaaagtgcattcagagtactgctgtcaaaccagctcctgacaatgggcct
aagcaaaatggaacagctgctgcttctcctgagaaaaccaaaaaagaacaaagtcaagac
ccaaagactgtggaggaagtaaaagtacaaggagagctgatggagtctgaggatcccaaa
gcctcagtagagggtgagacaaagccagagccacagacagaccagggaccagaaccagag
gaagcaaaggaggagccattgggtcccaatgatgtggtgtgtgactcctgcattgaaacc
ccctgcagggccttgaagtcctgtctcacctgtatggtgtcctactgcgaggcccacctc
cggcctcacctggagaacccaaagtttcagaaccacaggttggtggagccgctcagggac
attgagcggcgtacctgtgagagtcacaagtggcccttggagctcttctgctgtgctgat
tcctgctgcatctgtcaagactgtttaaaagaggagcatagaggccacaagacagtccct
gtagaggaggctcggagacagatagagaaagagctgagggagaaacagacacagatggtg
aaggtggttacggcaggagacaatgccatcaacaaactccaagacaacagagtttctatc
gagcaatcagtgacaaaagtacgatctgtgatcgagagccagttccaggagcttcaagtg
atggtggagatggccaagaaggaggtgactgagatcttggcggctgaggagagccaggcg
ctgaagcaagctgatggcatccaggttcacctggagcagaggtgcacagagctgaaaaaa
gctcaagcccaaacggagaagctgtccaaaaataaaaatgatgtagatttcctgcaggaa
tatgctgagtggaagaaagaagccactgataattctctatctggtatctatgttggcctg
gaggatcgtttggactccttcagtcaggtgatccaggagtccacaagcaatctttgcgac
atgctggtctctacatacattcagaaggtcaaggaaaaatgcaacaatgatgaaatagga
ataaagataacagttcaaacgaatactgcagccaagcatgacgtatccaaaccagaccca
cagacccgtactgactttctccagtatgccgctcaagtaagtttcgatgctaacacggcc
cacaagttcctccgcctgactgaggagaacaagaaggtgaccaacaccacgccctggcag
catccttatcccgatgttcctgaacgctttgagaaccatcggcaggtcctggctgctgaa
agcttctatgtaggtcgccactactttgaggccgatcttagtggtgaaggcacacatgtc
ggggtcacatacaagagcattgaccggaagggggatgagagcagcagctgcattacagga
aacaagttctcttggtgtctccagtggaacgggcgaacctactcagcatggcacagcgac
gaggagacaccactgaacgtggagaggttcactcgaattggtgtttacgttgactattcg
caaggccttctttctttctatggggtggacaataccatgacactccttcaccagtatcag
gcccagtttctagagccactttatccagctttcttcctgcccaagaaagagaatattgta
gttctggtggctcctggggaaccgttaccgctgaaaagcccctctccccctacttcacca
gaacatggaccctttgtttcataa
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