KEGG   Xiphophorus couchianus (Monterrey platyfish): 114152876
Entry
114152876         CDS       T05908                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114152876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xco03041]
    114152876
Spliceosome [BR:xco03041]
 Complex A
  U2 snRNP components
   U2 related factors
    114152876
 Complex B
    114152876
SSDB
Motif
Pfam: Surp cwf21 CID RRM_1 CTK3 SET_assoc
Other DBs
NCBI-GeneID: 114152876
NCBI-ProteinID: XP_027886795
LinkDB
Position
11:18702297..18713738
AA seq 929 aa
MFRPCSRRPAPTEELHSGIFLQLSIWLWLQKKQQQQKKNICHNQNGGALAKDSQSFWLRL
SMADRKRKPAASIKPITKKEKVELKKKEEEKAAEVFEEFVASFETSEKSKVKTFVRGGIV
NATKEEEESEIKKSKLYRPATKFVPVSQHSSPTSLSDSKKSAFKKKSEEKKKSNLELFKE
ELKLIQEEREERHKRKKNDSEAGGEGGGYGDLDVPLSGRSMLYDDLTAPVTTNLYINCIS
PKMNEDLLCREFCKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERAMAALDGKV
IMGFEMKLGWGKPARIPPQPLYTPAGVRVAPPPPSGLPFNAQPRDRFRNDFTKPLGSSKA
ELDKTLSEAVVKVVIPTERNLLFLIHRMVEFVVREGPLFEAMIMNKEKNNPDYRFLFDNK
SQDHVYYRWKLFSILQGESPTKWRTAEFRLFRGGSLWRPPILNSYTERSDEGAAVEEAAP
PEEEVKKGQLRAEHRQRLETLVEELTPSREDIASAMLFCLDRADAAEEVVGHISESFCSL
QVPLQKKISRLYLVSDILHNSCAKVAGASYYRKYFESKLPQIFEHLHAAHKNIQARLQAE
QFKQKAMNCFRAWEDWAIYPQPYLIQLQNIFLGFAKAGEEETETPEEVSGEIDGAPLDRR
LTDGLPMGKTPVDDIDGCPMGWDPLDGVPVDDIDGVPLNAPIDDIDGVPLDESKLPLSRM
PLSKWEKIGDSAQTDSKWDTLGEQDDEKKAHISCNSQDEDEDSESDSSADSCRSPNYEGA
VFPHMSESKRKRLREVEVKVMKLQDELESGKRQKKSGMSIQQQVETYRKKLLQKEFHKDE
EKTERSKSKDGQREERRHKERSKKNEDGDRRLSSKIGEKLRKSRSISPSRTKSPKWSKRS
RSPSPDQKVSKSKSRSPHRSHKKAKKSKH
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgttcagaccgtgcagcaggcgtcctgcccccactgaggagctacactcgggtatcttc
ttgcaactgagtatctggctgtggctgcaaaaaaaacaacaacaacaaaaaaaaaacata
tgtcataaccaaaatggtggagcattagcgaaagactcccagagtttctggctgaggtta
agcatggcggacagaaaaagaaaaccagccgcctccatcaaaccgatcacaaaaaaagag
aaagtagagctaaagaaaaaggaggaagagaaagctgctgaagtttttgaagaatttgtt
gcatcttttgaaaccagtgaaaaaagcaaagtaaagacttttgtacgtgggggaattgta
aatgcgactaaagaggaggaagaatcagagatcaagaaaagtaagctgtaccgacccgcc
acaaagtttgtccctgtgtctcaacattcctcaccaacgtccttgtctgacagcaaaaag
tctgctttcaaaaagaagtcagaagaaaagaagaagagcaatctcgaactttttaaagag
gaacttaagctcattcaggaggaacgtgaggaaaggcataaaaggaagaaaaatgactct
gaggctggaggagaaggaggcggatacggagatctggacgttccattatcgggacgatca
atgctgtacgacgacctgacggccccggtcaccactaatctctacattaactgcattagc
cccaagatgaacgaagacctactctgcagagagttttgtaaatatggccccttggccagc
gtgaagatcatgtggccccgaacggacgaggagcgctgcaggacttcaaacagagccttt
gtggctttcatgactcggaaagatgcagagagagccatggctgctctagacggtaaagtg
attatgggctttgaaatgaagctcggatggggcaaaccagcccgtatcccgcctcagcct
ctgtacacaccagctggggtgagggtggcacctcctcccccatctggtctccctttcaac
gctcagccccgggatcgcttccgcaacgacttcacaaagccgctgggctcgtccaaagca
gagctggacaagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaat
ctgttattccttattcacaggatggtagagtttgtggtgcgtgaaggcccgttatttgaa
gccatgataatgaacaaagaaaaaaacaacccagattacaggtttctttttgacaacaaa
agccaagatcatgtgtattaccgttggaaactgttctctatcctccagggcgagtccccg
acaaagtggaggacagcagagtttcggctgttcagaggcggctccttatggcgacccccc
atcctcaacagctacactgaaaggagcgacgagggagcggcggtcgaggaggccgctcct
cccgaggaggaggtgaagaagggccagctcagagctgagcaccgacagagactggagact
cttgtggaggagctgactcccagcagggaggatatcgccagcgccatgttgttctgtctg
gaccgggcagatgcagcagaggaagtcgtgggacacatttcagagtccttttgttcgctt
caagttccccttcagaagaagatttctagattatatctcgtgtcggacatcttgcacaac
tcgtgcgctaaagtagccggggcgtcatattatcggaaatattttgaaagcaagctacca
cagatatttgagcatctacatgcagcacataaaaacattcaagccagactgcaggctgag
cagtttaagcaaaaggccatgaattgttttagagcatgggaagactgggccatatatccc
cagccttatctaatccagcttcagaacatctttttggggttcgccaaagcaggagaggag
gagacggagacgccggaggaggtatctggtgagattgacggtgcaccattggacagaagg
cttacagacgggcttccgatggggaaaactccggtggacgacatagacggctgccccatg
ggctgggaccccctggacggagtccccgttgatgacattgatggcgtacccctaaacgct
cctattgatgacattgatggagttcccttggatgaaagcaaacttccgctctccagaatg
cctttgtctaaatgggagaagatcggtgatagtgcccaaactgactccaagtgggatact
ttaggggagcaggatgatgaaaagaaggctcatattagctgcaactcgcaggatgaagac
gaggactcagagagtgacagcagtgccgattcctgcaggtcgcccaactatgagggggca
gttttccctcatatgtctgagagtaaaagaaaaaggctgagggaggtggaagtaaaggtt
atgaaactccaagatgagctggaatctggaaagaggcagaagaagtctggaatgagcata
cagcaacaagtggagacctacaggaagaagctgctgcagaaggagtttcacaaagacgaa
gagaagactgagaggtcgaagtctaaagacgggcagagggaagaaaggagacacaaagag
aggagcaaaaaaaatgaggacggagacagaaggctgagcagtaaaattggagaaaagctg
aggaaatcaaggagcatctctccatcaagaacaaagtctcctaaatggtccaaacgttcc
cgatcgccatctccagaccagaaggtcagcaaatccaagtcccggtccccgcaccgctcc
cacaagaaggcaaagaagagcaaacactaa

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