Xiphophorus couchianus (Monterrey platyfish): 114155495
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Entry
114155495 CDS
T05908
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114155495
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
114155495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
TF_Zn_Ribbon
Cyclin_N
RB_B
Motif
Other DBs
NCBI-GeneID:
114155495
NCBI-ProteinID:
XP_027891204
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Position
13:complement(871428..951140)
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AA seq
682 aa
AA seq
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MSSRVCKHCGSSDIDVDQARGDAVCMGCGSVLEDNIIVSEVEFVETGGGGSLAVGQFVSS
EGGLKNPTFGDGHFSGMGSESRAQTLQRAKQHINTLGHQLQMNQHCLDTAFNFYKMALNK
SLTRGRKSDHIMAACIYLVCRTEGTPHMLLDLSDILQVNVYVLGKTFIALAKELCINAPA
IDPCLYIPRFTQMLEFGEKSREVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARLH
DFCRTTKEIVNVVKVCESTLRKRLTEFEDTPTSQLTIEEFMRVDLDGECDPPCFTAGLRK
KKDQQLKLELQKKIGDFEDEIQEFKDEIDAELESCRPKLRGVYAAYTKKDVFSDDDSSSS
SKEEPNEGDELHAVAKHFGRELEELTLEALIKLEGGELEEENQEENVPKRKGPSLASILG
RMSSSSSLGLSETFSHSVGDDVENDGTADSGELDLSGIDDSEINLYLLSDKEVQIKTALW
MAENADYLKAQKEKEAKIQKEKELGIYKEKKPRRPSKKHAAIRASTADEAIEKMLEQKKI
STKINYDVLKDLVVKPGSSPAGVGESPKMEPPAPRTPACTRRPAPTRTPLSLSKPLNTLG
KRLQPFISRQPKKKLAVEQTEAPPPPAATAEAPPSAVVVESGPVLYDDVDEEEDEEEETC
VSAMELLGGDGYGCDGDYDDGY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgtaagcactgcggcagctcggacatcgatgttgaccaggcgcgt
ggcgatgccgtctgcatgggctgcggctccgtcctggaggacaacatcatcgtctccgag
gtggagtttgtagagactggcggcggaggctccctggctgttggacagttcgtgtcttca
gaaggtggtcttaaaaatccaacttttggggatggacacttctcagggatggggtcagag
tccagagctcagacgttgcagagagctaaacaacacatcaacaccctgggccaccagctt
cagatgaaccagcactgcctggacacggccttcaacttctacaagatggccctcaataaa
agcctgacacgcggccgcaagtctgatcacatcatggccgcctgtatctacctggtctgc
cgcaccgagggaacgcctcacatgctgctggatctcagtgacattttgcaggtgaatgtc
tatgtgctgggaaaaaccttcatcgcgctggccaaagaactttgcatcaacgctccagct
atagacccatgtctttatataccccgtttcacccaaatgctggaattcggcgagaagagc
cgtgaggtctccatgacggcactgcgactggttcagcggatgaaaagggactggatgcac
acgggaaggcggccatctggactctgtggagcagctcttcttgttgctgctcgtctgcac
gacttttgtcgcaccaccaaagaaatcgtgaacgtggtgaaggtctgtgagagcacgctg
aggaaaaggctgacagagtttgaggacacgcccacgagtcagctgaccatagaggagttt
atgagggtagatctggacggggagtgtgacccaccgtgttttacagccgggctgaggaag
aaaaaggaccagcagctgaaactggagctccagaaaaagataggtgactttgaagatgaa
atccaggagttcaaggatgaaatagatgcagagctggagagctgcagacccaagctgaga
ggagtttacgctgcctacaccaagaaagatgtctttagtgatgacgatagctcctcgtca
tctaaggaggaaccgaacgaaggcgacgagcttcacgccgtggcgaagcacttcggtaga
gaactggaagagctcaccctagaggctctcatcaaactagaggggggagagttagaggag
gagaaccaggaggagaatgtgcccaagcgaaaaggtccctcactggcttccatactgggg
agaatgtcgtcctcatcctctctgggcctctcagaaaccttcagccactctgtcggggac
gacgtggagaacgatggcactgctgacagcggagagctggacctgagtggcatagatgac
agtgagatcaatttgtatctgctgagtgacaaagaagtccaaatcaaaactgcactctgg
atggcagaaaatgcagactacctaaaagctcaaaaagaaaaggaagcaaagatccaaaaa
gagaaggagcttgggatctataaagaaaaaaagcccagacggccctcaaaaaagcacgct
gccatcagagccagcactgctgacgaggccattgagaagatgttggagcagaagaagata
tccaccaagatcaactacgacgtgttaaaggacctcgtcgtgaagcctggcagcagcccg
gctggtgtgggggagtcaccgaagatggagccgccggcacctaggacgcccgcctgcacc
cgcagacctgcgcccactagaacccccctgagcctcagcaagccgctcaacactctggga
aaacgattgcagccgttcatcagcagacaacccaagaagaagctggctgtggagcagact
gaagcccctcccccaccggcagcgactgcagaggccccgcccagtgcagttgttgtcgag
agtggacccgtcctgtatgacgatgtagacgaggaagaggatgaagaggaggagacctgt
gtcagtgccatggagctgctgggcggcgacggttatggatgtgacggggattatgatgat
gggtactag
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