Xiphophorus couchianus (Monterrey platyfish): 114159437
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Entry
114159437 CDS
T05908
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114159437
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114159437
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
114159437
NCBI-ProteinID:
XP_027897211
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All DBs
Position
16:19725863..19792182
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AA seq
460 aa
AA seq
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MLMSTDVASIMLPVNRGIMERDRDLETAAGGAHPNAAAGAAVVRGMKRGDPEPDAQTAAA
LTDLTGAECKRPRIDGSGEIGQNNEPLNPGFHGYAPHSQGSQDSAGGQEGLVAPPFTTFP
PPPPPQNGLPGTEFGPGAMFAAAGQSAVEVGAGANGATTTANNNNGKTEETSQGEAGAQC
SAGGTGAGGSTGDSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS
KGFGFVTFENSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKIVSPYPNGEALSTLP
YAGWKLSPMVGAVYGPEIYAVPGFPYPTAAAAAAATTAAAFRGAHLRGRGRPVYSAVRAA
VPQPAIPTYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAYRYAQPAAVTGATAAAAAYSD
SYGRVYTTDPYHALTPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctataatgctgcccgttaatcggggaataatggag
cgcgacagggacctcgagacggcggccggcggagcgcatccgaacgcggccgccggagcc
gcggttgtccgggggatgaagcgcggagacccggagcccgacgctcagaccgccgctgcc
ctgactgacctgaccggggcggaatgcaagagaccgaggatagacggctccggtgagatc
ggacagaacaatgagcctttaaaccccggtttccatggatacgcacctcacagtcagggc
tcccaggactcagccggcggacaggagggtttagtagccccgccctttacgaccttcccc
ccacctccccctcctcaaaacggcctaccggggacggagtttggtccgggggccatgttt
gccgccgcgggccaaagtgcagtggaggtcggagccggtgctaacggagccacgactaca
gccaacaacaacaacggaaagacggaggagacgtctcagggcgaggcgggtgcgcagtgt
tccgcaggaggcacgggagcgggcggctcaacgggggactccgcggaggccaaggggacc
cccaagcgcctccacgtctccaacatccccttccgcttccgggacccggacctcaggcag
atgtttgggcaatttgggaagattctggatgtagagattattttcaatgagagagggtca
aagggtttcggctttgtgacatttgaaaacagcgccgacgcagagaaagccagagaaaag
ctccacggcacgctggtggagggccgtaaaattgaggtgaataatgccaccgccagggtg
atgactaacaagaaaatcgtcagcccttaccctaatggagaggctctcagcacgctgccc
tatgcagggtggaagctaagtcccatggtgggagcggtatatgggcccgagatctacgca
gtccctgggtttccctacccaaccgcagcggcggcagcggcagccacgacggcggcggcg
ttccgcggcgcccacctcagaggccgaggccggcccgtttacagcgccgtcagggcggcc
gtgcctcagcccgccatccctacataccctggcgtggtgtatcaggatgggttttacgga
gctgcagacttatatggaggctatcctgctgctgccgcggccgcggccgccgccgcatac
cgctacgcccagcctgctgccgtaaccggagcaacagccgcagctgccgcctacagtgac
agttatgggcgggtatacactacagatccgtaccacgctttaactccagctgctgctgcc
tacggagtgggagccatggctagtttataccgggcaggatacagtaggtttgctccttac
taa
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