Xiphophorus couchianus (Monterrey platyfish): 114160880
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Entry
114160880 CDS
T05908
Symbol
lrig3
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 3
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
114160880 (lrig3)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
Ig_2
LRR_5
LRR_9
V-set
C2-set_2
LRR_6
C1-set
LRRCT
PRIMA1
Motif
Other DBs
NCBI-GeneID:
114160880
NCBI-ProteinID:
XP_027899581
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Position
17:16306990..16330624
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AA seq
1106 aa
AA seq
DB search
MPSSPQPRSLVRFAVFFLPFVGLERGSGAHAGTCPPPCVCFGELVDCGRVKRGRIPDTIP
EWTVQLDLSHNKLQVLDGNLFSRLPHLKELKLNHNKLEVIPDLGPYASNITTLILANNRI
SGISEEQLGPFASLETLDLSSNKIVEIKTSSFPALPLMNLFLCNNRISSLESGWSTNLAS
TLQVLELSHNRISNIPARSFQLPNLQHLDLSRNQIRRVEGLTFQDLPTLRSLKLQKNRLS
GLMDGAFFGLGNMEVLQLGFNNLTEVSKGWLYGLGALQQLHLEHNTISRIQPETWKCCQK
LSKLNLSSNHLSRLEESSFDGLSLLDELHVGNNRVSFIAGGAFRGLSNLQMLDLQNNEIS
WTIEDMNGPFSALERMKTLFLQGNQIRSVTKKSFSGLDELQHLDLNNNGIMSIQANAFSQ
MKNLQELCLNTSSLLCDCQLKWLPIWVEEQSFLPCVNASCAHPQMLKGRSVFLVRQEEFV
CDDFPKPKITVQPETQSALKGTNVTFVCSAASSSDSPMTFAWKKDNEVLNDAEIHNQAHL
RVQGDAGSETEVTEYTTTLQLRNVEFSNEGKYQCVISNHFGSSYSSKARLTVNILPSFTK
TPMDLTIRAGAMARLECAATGHPSPQIAWQKDGGTDFPAARERRMHVMPEDDVFFIAGVK
TEDIGVYSCTAQNTAGVISANATLTVLETPYFLRPLTDRTVAKGETAVLQCIAGGSPPPR
LNWTKDDSPLVVTERHFFAAANQLLIIVDAAEVDAGKYTCEMSNALGTERGNVRLAVLPN
PNCDSGVQSGAGNVMGSGSGADDDGWTTVGIVIIAVVCCVVGTSLVWVVIIYHTRRRNED
CSVTNTDETNLPADIPSYLSSQGTLADRQDAYIPSESGSSHQYIASSYSGFYLQTKDVNG
LCQLDTGSEADMEAAIDPLLCHYQGPIGSLLCRDNIYPSDPSEVFTGFSIDQKPVGMESY
SGSLTKPKTMDILLSEHFDVCPPSLVMQLPNTSLHQDPAPQQRDRQTTADEEDAFDCGKP
HKCVSPCNTFMGTFGKAPWTPHKDLYIPPSVTYHGITLHENPYTALDVDSDLEQSIKDSL
EQSGRVYEQPFDGRRTDAISQRRMSS
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctctccgcagcctcgcagtctggtgaggtttgccgtgttttttctgccgttc
gtgggactggagcgtggatcgggggcccacgctggaacgtgcccccctccctgcgtgtgt
tttggggaacttgtggactgcggtcgggtgaaaaggggccgaattccagacacgatcccg
gagtggacagttcagctggacttgagccataacaaattgcaagtgctcgacgggaatttg
ttttctagactgccgcatttaaaggaactaaagctgaatcacaacaaactggaggtaata
ccagatctgggtccttatgcttcaaacatcacaaccctcattctagcaaacaacaggatc
agtgggatctcggaggagcagctcggacccttcgcctccctggaaacgctcgacctcagc
agcaacaaaatagtggaaataaagaccagctccttcccggctctgcctctgatgaacttg
ttcctctgcaacaatcgcatctcgtctctggagtcgggctggtctaccaacctggccagc
actctgcaggttcttgagctcagccacaaccggatctccaacatcccagccaggtccttc
cagctgcccaacctccagcatctggatttgagcagaaaccagattcgccgggtggagggc
ttgactttccaagacctgcccaccctccgctcgctgaagctgcagaagaaccgcctctct
gggctgatggacggggccttctttggcctcggcaacatggaagtcctgcagctgggcttt
aacaacctgacggaggtgagcaaaggctggctgtacggcctgggggctctgcagcagctc
cacctcgaacacaacaccatcagcaggatccagcctgaaacctggaagtgttgccagaag
ctcagcaagctcaacttgtcctcgaatcacctgtccaggctggaggagtccagcttcgac
ggcctcagcctgctggacgagctccatgtgggaaacaaccgcgtgagcttcatcgcgggc
ggagcgttccgcggcctctccaacctgcagatgctggatctccagaataatgaaatctcc
tggactattgaagacatgaatgggccgttttctgctcttgaaaggatgaaaacgctgttc
ctgcaggggaaccagattcgctcggtgaccaaaaaatccttctcaggcctggacgagctg
cagcacctagatctgaacaataacggcatcatgtccatccaagctaacgccttctcccag
atgaaaaaccttcaggagctgtgtctgaatacctccagtctcctgtgtgactgccagctg
aagtggcttcccatctgggtggaagagcaaagcttcctgccctgcgtcaatgccagctgc
gcccacccgcagatgctgaagggcaggagtgtgttcttggtacgccaggaggagtttgtg
tgtgatgactttccaaagcccaagataacggtgcagccagagacccagtcagccctcaaa
ggaaccaacgtgacattcgtctgctctgccgcgagctccagcgactcccccatgaccttt
gcctggaagaaagacaatgaagtcctgaacgatgccgagatccacaaccaggcccaccta
agggtgcagggcgatgcgggaagtgagacggaagtcacagagtacaccaccacattgcag
ctgcggaacgtggagttctccaacgaggggaagtaccagtgtgtcatctccaaccacttt
gggtcgtcatattcctctaaggcccggctcacggtgaacatacttccttctttcaccaaa
acgccaatggacttgacgatccgggcaggagcaatggctaggctggaatgcgcggccacc
ggtcacccatcccctcagatcgcctggcagaaagacgggggcaccgactttcctgccgct
cgcgagcgtcgcatgcacgtcatgcccgaggatgacgtcttcttcattgcgggtgtcaag
acggaggacattggtgtctacagctgcacggctcagaacacagctggagttatttcagca
aatgcaactctaactgttcttgaaacgccctatttcctgcgccctctcacggatcggact
gtggccaagggcgagacagccgtcctccagtgcatcgccggtggaagccctcctcctaga
ctgaactggaccaaagacgacagtcccctagtggtcaccgagcgccacttctttgccgct
gccaaccagctcctcattattgttgatgctgctgaggtggatgcgggaaagtatacttgc
gagatgtcgaacgctctgggcacggagagggggaacgtacgcctggccgtcctgccgaac
cccaactgtgactctggagtgcagagtggcgccgggaatgtcatggggagcggatcaggg
gcagatgatgatggctggaccacagtggggattgtcatcatcgcggtggtttgctgcgta
gttggaacttccttggtctgggtggtcatcatctaccacacccgccggcggaacgaggac
tgtagcgtcaccaatacagatgagaccaatctacctgcggatattcccagctacctctcc
tcccagggaacactagcggaccgacaggatgcctacatcccgtctgaaagcggtagcagc
catcagtacatagcatcatcctacagtggtttctacctgcagaccaaagacgtgaacggt
ctttgtcagctggatacaggaagtgaagctgatatggaagcagccatcgatcctttgctt
tgccactaccaaggtccgattggctcgctgctttgtcgcgataacatatatcccagtgac
ccatccgaagtcttcacaggtttttcaattgaccaaaagccggttggcatggagtcctac
agcggcagcctgaccaaacccaaaacaatggacattttgctatcggagcattttgacgtg
tgcccgccctctctagtgatgcagcttccaaacaccagcctacatcaagaccctgcgcct
cagcagagggaccggcagacaacggcggatgaggaagatgctttcgactgtggaaaacct
cataaatgtgtctctccctgcaacactttcatgggtacgtttgggaaagctccttggact
ccccataaggacctatacatcccgccgtcagtcacgtatcatgggataactcttcacgag
aatccttacactgctttggacgttgactcggacctcgagcagagcatcaaggactcattg
gagcagagcggccgtgtgtatgagcagccatttgacggccgtagaactgatgccatctca
caacgtaggatgagctcctag
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