Xanthomonas campestris pv. raphani: XCR_2294
Help
Entry
XCR_2294 CDS
T01872
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00521
Streptomycin biosynthesis
xcp00523
Polyketide sugar unit biosynthesis
xcp00541
O-Antigen nucleotide sugar biosynthesis
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01250
Biosynthesis of nucleotide sugars
Module
xcp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XCR_2294 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XCR_2294 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XCR_2294 (rfbC)
Enzymes [BR:
xcp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XCR_2294 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEL07179
UniProt:
G0CEA1
LinkDB
All DBs
Position
complement(2386033..2386614)
Genome browser
AA seq
193 aa
AA seq
DB search
MIFRPTPLSGAFIIEPEPRGDARGWFARVFCTQEMAQAGLVDQFVQVNNSFNAETGTLRG
MHYQLPPAPEVKIVRCIRGALWDAIVDLRPDSPTYLQWYGVELTADNRLALYVPRGFAHG
FITLQAQTEALYFASAMYTPAAERGLRWDDARIGIRWPCTPALVSDKDAAWPEFNDQVHG
VTQLTGLTQQERA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccgccccacgccgctgtctggtgccttcatcattgagcccgaaccgcgtggc
gatgcgcgtggatggtttgcgcgggtgttctgtacccaggagatggcgcaggccgggctg
gtagaccagttcgtccaggtcaacaactccttcaacgcagagaccggcaccttgcgcggc
atgcactatcagctgccgcccgcgccggaggtcaagatcgtgcgctgcatccgcggcgcg
ctgtgggatgccatcgtcgacctgcgcccggattcgcccacctacctgcagtggtacggg
gtcgaactcactgccgacaaccgcctggcactgtatgtgccgcgcgggtttgcgcatggc
ttcatcacgctgcaggcgcagaccgaagcactgtatttcgccagtgcgatgtataccccg
gctgccgagcgcggcttgcgctgggacgatgcgcgcatcggcatccgctggccgtgcacg
cccgcattggtgtccgacaaggacgccgcctggccggagttcaatgaccaggtgcatggc
gtgacccaactgaccgggctgactcaacaggagcgcgcatga
DBGET
integrated database retrieval system
