Xanthomonas campestris pv. raphani: XCR_3115
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Entry
XCR_3115 CDS
T01872
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XCR_3115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_3115
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
XCR_3115
DNA repair and recombination proteins [BR:
xcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XCR_3115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEL07979
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All DBs
Position
3290220..3290759
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AA seq
179 aa
AA seq
DB search
MSGYCSIAPGHPVHSHYHDHEYGYPQRDERELFERLVLEINQAGLSWETILRKRGNFQRA
YDGFDVDTVAAYGEAEIARLMQDAGIIRNRLKVLAAIHNAQVIQRLRATHGSFANWLDTQ
HPLDKPAWVKVFKKTFRFTGGEITGEFLMSLGYLRGAHHADCPVFADIQALSPPWMRSA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttattgcagcatcgcacccggccacccggtgcatagccactatcacgatcac
gaatacggctacccgcagcgcgacgaacgcgagctattcgaacgcctggtgctggagatc
aaccaggccggcctgagttgggaaaccatcctgcgcaagcgcggcaacttccagcgtgcc
tatgacgggttcgacgtagacaccgtggccgcgtacggcgaggcggagatcgccaggctg
atgcaggatgccggcatcattcgcaatcgcctgaaggtgctggccgccatccacaacgcg
caggtgatccagcgcctgcgcgcaacgcacggcagctttgccaactggctggacacacaa
catcccctcgacaagccggcctgggtgaaagtgttcaagaagaccttccgtttcactggt
ggcgaaatcaccggtgaattcctgatgagcctgggctacctgcgcggcgcgcaccatgcc
gactgcccggtatttgcggacattcaggcactgtcgccgccgtggatgcgcagcgcgtga
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