Xanthomonas campestris pv. raphani: XCR_4406
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Entry
XCR_4406 CDS
T01872
Name
(GenBank) alpha-amylase
KO
K16147
starch synthase (maltosyl-transferring) [EC:
2.4.99.16
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00500
Starch and sucrose metabolism
xcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
XCR_4406
Enzymes [BR:
xcp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.16 starch synthase (maltosyl-transferring)
XCR_4406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgE_dom_N_S
GLGE_C
Alpha-amylase
GHL6
Melibiase_C
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
AEL09262
UniProt:
G0C9Z1
LinkDB
All DBs
Position
complement(4718495..4721596)
Genome browser
AA seq
1033 aa
AA seq
DB search
MNEAAVADPSRLEARCVAAREAGCDYVVVAPPFARDAQGRLVEPNAGDAQAQQLQTCVQA
AQRAGVKLLLDVRLDEVGGSSAVVRDNPQWFRARSTAVPDPRQPRATPEVAEARFAYAQE
GAALVEWWSARLLEWVNQGVGGFRLLQPQQIPAQRWRELITRVHAQAPEVIFAAWTPGLG
SEALQQLAGAGFDAAFSSLAWWDGRGSWFFDEDAALRALAKRVVAIVEAADGSSAARRAQ
HWQLASALGGAWLLEDHQLESLPLRVRATDGPQPDNAGLRLRPLLREGTGLTAVAVEPLG
GLPSLLLINGDPDHVVPVPAPDLLRLLGDAEALVAEDGRTLSGSTLEALEPGEVRVYRSV
PARHVLAVPRMRPRAQTAAAWPRVCIESVTPSVDNGRFPVKRTVGDRICVEADAFCDGHD
RIAVAVLWRPADAKTWASAPMRALGNDRWRAEFPLERIGTYEFRVEGWRDVFATLHADLE
KKRAASTVLPVDVQEAVAVVQAAHARSDGALATQLQDILTRIGAQSEPLQQLAIVLEPDT
AQAMALADDKPFRSEYPVTFRVESERRAAHFSSWYELFPRSQSGDGQRHGTFDDVIGRLA
HIRAMNFDVLYMPPIHPIGAKNRKGRNNAVTAQDGEPGSPYAIGAADGGHTEVHAELGGL
EGFRRLIQAARAHGLEVALDFAIQCAPDHPWLQEHKDWFTWRADGSIPYAENPPKKYQDI
VNVDFYASGAVPDLWNTLRDAVLFWVNEGVTLFRVDNPHTKPFPFWEWLIADVRGRRPDV
VFLSEAFTRPKMMYRLAKCGFSQSYTYFTWRNHKHELREYIEELNDGVPRECFRPHFFVN
TPDINPLFLQTSGRNGHLIRAALATTLSGLWGMYQGFELCEATPLAPGKEEYLDSEKYQL
RAWPERAPGDIVDEITRFNQLRRMHPELQSHLGTRFYQAHNDQVLYFGKFLDAGYLSRSR
SMVLVAINLDPQAGQDAEVEIPLWELGLPDHASVAVEDLWDGHRFTWHGKTQHIRLEATR
PFALWRIRAGEVA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaagcggcggttgccgacccatccaggctggaagcgcgctgcgtggcggcgcgt
gaagccggttgcgactatgtggtggtagcgccaccgtttgcgcgtgacgcgcaagggcgc
ctggtggaacccaacgccggtgatgcccaggcgcagcaactgcagacctgcgtgcaggcc
gcgcaacgggcaggcgtcaagctgctgctggatgtgcgcctggacgaggtgggcggctcc
agtgcggtggtgcgcgataacccgcagtggttccgcgcccgcagcaccgcagtaccggat
ccgcgccagccgcgtgccacgcccgaggtggctgaggcgcgctttgcctatgcgcaggaa
ggtgcggcgctggtggagtggtggagcgcgcgcctgctggagtgggtcaaccagggcgtg
ggcggcttccgcctgttgcagccccagcagatccccgcacagcgctggcgtgagctgatc
acccgcgtgcatgcacaggcgccggaagtgatcttcgcggcgtggacacccgggttgggt
agcgaagcgctgcagcagcttgccggtgccggcttcgatgcggcgttctcctcgctagcc
tggtgggatggccgtggcagctggttcttcgatgaagacgcagcgctgcgtgcgctggcc
aagcgggtggtggcgattgtcgaggctgccgatggcagcagcgccgcacgccgcgcgcag
cattggcaattggcgagcgcactcggtggcgcctggttgctggaagaccatcagctggag
tcgttgccgctgcgcgtgcgtgccaccgatggaccgcagccagacaatgcgggcctgcgg
ctgcggccgttgttgcgtgaaggcaccggcctgacggcagtggcggtggagccgcttggc
gggctgccctcgctcttgttgatcaatggcgaccccgatcatgtggtgccggtgcccgca
ccggatctgttgcgcctgctcggcgatgccgaggcattggtggccgaagacgggcgcacc
ctctccggctccacgctggaggcgctggaacctggcgaagtgcgcgtgtaccgcagcgtg
ccggcgcggcatgtgctggcagtcccgcgcatgcgcccgcgtgcgcagacggcggcggcg
tggccacgggtgtgcatcgagtcggtgacgccatcggtggacaacggccgcttcccggtg
aagcgcactgtgggcgaccgtatctgcgtggaggccgacgccttctgcgacgggcatgac
cgcattgcggtggcggtgctgtggcgcccggccgatgccaagacctgggccagcgcgccg
atgcgtgcgctgggcaacgaccgctggcgcgcggagttcccgctcgagcgcatcggcacc
tacgaattccgcgtggaagggtggcgcgacgtattcgctaccttgcatgcggatctggaa
aagaagcgcgccgccagcaccgtgctgccggtggacgtgcaggaagcggtggcagtggta
caggctgcgcatgcacgcagcgacggcgcgttggccacccagttgcaggacatccttacc
cgcatcggcgcgcagagtgagccgttgcagcaattggcgatcgtgctggagcccgacacc
gcgcaagcgatggcgctggccgacgacaagccgttccgctccgaatacccggtgacgttc
cgggtggaatccgaacgccgcgcggcgcatttttccagctggtacgaattgttcccgcgc
tcgcagagtggtgacgggcagcgccacggcaccttcgatgatgtgatcgggcggctggcg
catatccgcgcgatgaacttcgacgtgctgtacatgccgccgatccacccgatcggcgcc
aagaaccgcaagggccgcaacaacgcggtcaccgcgcaggacggcgaacccggcagcccg
tacgccattggtgcagccgatggcgggcacaccgaggtgcatgccgaactgggtggacta
gagggcttccgccggctgatccaggccgcacgcgcgcatggcctggaagtggcgctggat
ttcgccatccagtgcgcacccgaccacccgtggctgcaggaacacaaggactggttcacc
tggcgcgcggatggctcgatcccgtatgcggagaacccgccgaagaaataccaggacatc
gtcaacgtcgacttctacgccagcggtgcggtgccggatctgtggaacacgctgcgcgat
gcggtgctgttctgggtcaacgaaggcgtcaccctgttccgcgtggacaacccgcacacc
aagccgttcccgttctgggaatggttgattgccgatgtgcgcgggcgccgcccggacgtg
gtcttcctgtccgaagcctttacccggccgaaaatgatgtaccgcctggccaagtgtggc
ttctcgcagtcgtacacctacttcacctggcgcaaccacaagcacgagctgcgcgagtac
atcgaagagctcaacgacggcgtgccgcgcgagtgcttccgcccgcatttcttcgtcaat
acgccggacatcaatcccttattcctgcagaccagcgggcgcaacgggcacctgatccgc
gccgcgctcgccaccaccctctccgggttgtggggcatgtaccagggctttgaattgtgc
gaagccaccccgttggcgccgggcaaggaagagtatctggactcggagaaataccagctg
cgtgcctggcccgagcgggcaccgggcgacatcgtcgatgagatcacccgcttcaaccag
ctgcgccgcatgcacccggaattgcagtcgcatctgggcacgcgcttctaccaggcgcac
aacgaccaggtgctgtacttcggcaagttcctggatgccggctacctgtcgcgcagccgc
agcatggtgctggtggcgatcaacctggacccgcaggcgggccaggatgccgaggttgaa
attccgctgtgggagttgggcctgcccgatcacgccagcgtggcggtggaagacctgtgg
gacggccatcgcttcacgtggcatggcaagacgcaacacatccggttagaggcgacgcgg
ccgttcgcgttatggcgcatccgcgcaggagaggtcgcatga
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integrated database retrieval system
