Xanthomonas cucurbitae: EBN15_02460
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Entry
EBN15_02460 CDS
T06553
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00521
Streptomycin biosynthesis
xcz00523
Polyketide sugar unit biosynthesis
xcz00541
O-Antigen nucleotide sugar biosynthesis
xcz01100
Metabolic pathways
xcz01110
Biosynthesis of secondary metabolites
xcz01250
Biosynthesis of nucleotide sugars
Module
xcz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EBN15_02460 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EBN15_02460 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EBN15_02460 (rfbC)
Enzymes [BR:
xcz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EBN15_02460 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QHG86004
UniProt:
A0A6P1L2E8
LinkDB
All DBs
Position
588629..589186
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AA seq
185 aa
AA seq
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MKVIATDLPGCMVIEPAVFGDERGVFFETWNAERFGGHGLPTHFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDIAVDIRRGSPHFGRWTAVLLSAKNRRQVWIPEGFAHGFA
VLSERALFSYLCTDIYVKEADASVRWDDATIGVDWPISNPLLSAKDANAPFLSDVPAERL
PVFVP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtgatcgcgaccgatctgccgggctgcatggtgatcgaaccggccgtgttcggt
gacgagcgtggcgttttcttcgaaacctggaatgcggagcgtttcggcggacatggcctg
ccgacgcacttcgtgcaaagcaacgtctccacgtccgccaagggcgtgttacgcgggctg
cattaccagtggccgcgtccccagggcaagctggtgagcgtgctggaaggcgaggtgtat
gacatcgcggtggacattcgtcgcggttcgccccatttcgggcgatggaccgcggtgctg
ctcagtgcgaaaaaccgtcggcaggtgtggattccggaaggcttcgcgcatggcttcgcg
gtgttgtcggaacgggcattgttcagctatctgtgcaccgacatctacgtcaaggaagcc
gatgcgagcgtgcgctgggatgacgcgacgatcggcgtcgattggccgatcagcaatccg
ttgctgtccgccaaggatgccaatgcaccgttcctgagcgatgtgccggccgagcgcctg
ccagtcttcgtgccgtga
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