Xanthobacter dioxanivorans: EZH22_18365
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Entry
EZH22_18365 CDS
T07733
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xdi
Xanthobacter dioxanivorans
Pathway
xdi00521
Streptomycin biosynthesis
xdi00523
Polyketide sugar unit biosynthesis
xdi00541
O-Antigen nucleotide sugar biosynthesis
xdi01100
Metabolic pathways
xdi01110
Biosynthesis of secondary metabolites
xdi01250
Biosynthesis of nucleotide sugars
Module
xdi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EZH22_18365 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EZH22_18365 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EZH22_18365 (rfbC)
Enzymes [BR:
xdi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EZH22_18365 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QRG05084
UniProt:
A0A974PKB0
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All DBs
Position
complement(3938027..3938596)
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AA seq
189 aa
AA seq
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MTVFTPLALPDVILATPRRHGDARGYFCETYVQPLYAANGIACAFVQDNESLSALPGTVR
GLHLQAPPFAQAKLVRVLSGAIFDVAVDVRAGSPTHGQWVGARLTADGGEQLFIPHGFAH
GFCTLAPDTRVAYKVDAVYDKASERGIVWNDPDIAIDWTFGHGDAILSDKDRILPRLKDF
DSPFVYGAA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcttcacgcccctcgccctgcccgatgtgatcctcgccaccccccgccggcac
ggcgatgcccgcggctatttctgcgagacctacgtgcagccgctctacgcggcgaacggg
atcgcctgcgccttcgtgcaggacaacgagtcgctctcggccctgcccggcaccgtgcgc
ggcctgcacctgcaggcgccgcccttcgcccaggcgaagctcgtgcgcgtgctctccggc
gccatcttcgacgtggccgtggacgtgcgggcgggctcgcccacccatggccagtgggtg
ggcgcgcggctgaccgcggacggcggtgagcagctcttcattccccacggtttcgcgcat
gggttttgcaccctcgcgccggacacgcgggtcgcctataaggtggacgcggtctatgac
aaggcgagcgagcgcggaatcgtctggaacgatcccgacatcgccatcgactggaccttc
ggccacggcgacgcgatcctgtccgacaaggaccggattttgccccggctcaaggatttc
gacagccccttcgtctatggggcggcgtga
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