Xenorhabdus doucetiae: XDD1_0115
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Entry
XDD1_0115 CDS
T03784
Symbol
rph
Name
(GenBank) Ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xdo03016
]
XDD1_0115 (rph)
Enzymes [BR:
xdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
XDD1_0115 (rph)
Transfer RNA biogenesis [BR:
xdo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XDD1_0115 (rph)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
CDG15826
UniProt:
A0A068QMU1
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Position
130126..130869
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AA seq
247 aa
AA seq
DB search
MSLVGKRPAGRAAGQVRPIKMTRHYTKHAEGSVLVEFGDTKVLCNASVEEGIPRFLKGQG
QGWITAEYGMLPRATNSRNAREAARGKQTGRTMEIQRLIARSLRAAVDLKKLGEFTITLD
CDVIQADGGTRTAAISGACVALVDALNKLVADGKLKESPLKSMVAAVSVGIVEGEGRCDL
EYVEDSAAETDMNIVMMDDGRMIEVQGTAEGEPFSHDELLSLLSLAKEGLETIFKAQRDA
LEQVPLK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagcttagtaggaaagcgtccggcgggaagagcagcggggcaggtgcgtcctattaaa
atgacccgtcattacactaaacacgcggaaggctctgttctggtggaatttggggatacc
aaagtgttatgtaatgcctccgttgaagaaggaattccacgtttcctgaaaggtcagggg
caaggctggatcacggccgagtacggcatgttgccgcgggcgaccaatagccgtaatgcg
cgtgaagcggccaggggcaaacaaaccggccgcacgatggaaatccaacgcctgattgca
cgttcgctgcgtgctgccgtcgatttgaaaaaactgggtgaatttaccattacgctggat
tgcgatgtgatccaagcggatggcggtacgcgcacggcggctatttctggtgcttgtgtg
gcattggttgatgccctgaataagttagttgcggatggcaaactgaaagaaagcccactg
aaatcgatggttgcggcagtctctgttgggatcgttgagggtgaaggacgttgtgatctg
gaatatgtcgaagactctgcggccgaaactgacatgaatattgtcatgatggatgacggc
agaatgattgaagtgcagggcacggcagaaggtgaaccgttcagccatgatgaattgctc
tcactgctctcattggcaaaagagggactggagacgattttcaaagcgcagcgagatgcg
ttggaacaagttccactaaaataa
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