Xanthomonas dyei: NYR95_18780
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Entry
NYR95_18780 CDS
T09460
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00521
Streptomycin biosynthesis
xdy00523
Polyketide sugar unit biosynthesis
xdy00541
O-Antigen nucleotide sugar biosynthesis
xdy01100
Metabolic pathways
xdy01110
Biosynthesis of secondary metabolites
xdy01250
Biosynthesis of nucleotide sugars
Module
xdy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NYR95_18780 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NYR95_18780 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NYR95_18780 (rfbC)
Enzymes [BR:
xdy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NYR95_18780 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOB53346
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Position
complement(4337430..4337987)
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AA seq
185 aa
AA seq
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MKVIETKLSGCVVIEPAVFGDERGYFFETWNAERFGQQGLPTRFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDVRHGSPTFGQWAAVVLSAENKKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISDPVLSAKDATAPFLTDVPVERL
PVFSP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgattgaaaccaagctgtctggctgcgtagtgatcgagccggcggtgtttggc
gatgaacgtggctattttttcgaaacctggaacgcagaacgctttggtcaacagggcttg
ccgacacggttcgtgcaaagcaacgtgtcgacgtcggccaaaggcgtgttgcgcggcctg
cactaccagtggccgcggccgcagggcaagctggtcagcgtgctcgaaggcgaggtttac
gacgtggctgtcgacgtacgtcatggatcgcccaccttcggtcagtgggcggcagtggta
ttgagcgcagaaaacaaaaagcaattctggattccggaaggctttgcgcacggctttgcg
gtgctgtcagagcgcgcggttttcagctatctatgcactgacgtctacgtcaaggaagcc
gatgcaggcgtacggtgggacgacgcggcgatcgggatcgactggccgatcagcgatcct
gtgctctccgccaaggatgcaactgcgccattcctgaccgatgtgccggtcgagcgcctg
ccggtgttttcgccgtga
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