Xenia sp. Carnegie-2017 (soft corals): 124435220
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Entry
124435220 CDS
T08024
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xen03016
]
124435220
Enzymes [BR:
xen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
124435220
Transfer RNA biogenesis [BR:
xen03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124435220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
DUF3858
Motif
Other DBs
NCBI-GeneID:
124435220
NCBI-ProteinID:
XP_046841119
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MTCMSNFVINRRELSDELKIITYFAEVLKDRLQQDLKLNTKLIDLRKYDPDESLRNEVKD
TILCIFIMATYTDGQPTDGAEWFYKWLKETAVDFRVQKTLLSGLNYCVLGLGNSLYADHF
NKVGKDVDKWLHDLSAIRFMALGTSDENVSKSENGGKEEDFRAWVQILMKKLKAPGFYSA
NKGNGLLKNKDEEISDYQNHNKSTNAKEQLYDSASDVEQDNENGYTDGAEVVDVEDLGNI
VGKMNEKKKEGVSLVPKEMITPLLRKSLTKQGYKLVGSHSGVKLCRWTKSMLRGRGGCYK
HTFYGIESHRCMESTPSLACANKCVFCWRHHTNPVGTEWRWKMDEPDDIVNEAIKKHCDM
IKQFKGVPGVKAERLEEGMAVRHCALSLVGEPIMYPKINDLLTLLHGRGISSFLVTNAQF
PDAIRNLLPVTQLYVSVDASTRESLKKIDRPLFRDFWSRFLESLRALADKGQRTVYRLTL
VKGWNAEEIKGYTELVSLGRPDFIEVKGVTYCGDSKASSLTMKNVPWHEEVIGFVKQLTD
ALPDYEIACEHEHSNCLLIAKKKFKVDEKWHTWIDYSKFHSLMKRYQNTNGLASFTSLDY
MEATPSWAVFGDVNRGFDPNEARFKRKGKMKDHASI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcatgtcaaactttgtcataaatcgtcgagagctttcagatgagctaaagatc
atcacctattttgcagaggtattgaaggatagactacaacaagatcttaaactcaacaca
aaactcattgatttacggaaatatgatcccgatgaatctttgaggaatgaggtcaaagat
accatattatgcatctttataatggctacttacactgatggtcaacccacagatggagca
gaatggttctacaaatggcttaaagaaactgctgttgatttccgagttcagaaaacactt
cttagcgggctcaactattgtgttttgggtcttggaaattcactttacgcagatcatttt
aataaggtgggtaaggatgttgataaatggctccatgacctgtctgccatcaggttcatg
gctcttggcacgtcagacgagaatgtatcgaaaagtgaaaatggcggaaaggaagaagac
tttcgtgcttgggtacaaattttgatgaagaaactgaaagcacctggattttattcggca
aataagggaaacggtctcttgaaaaataaagacgaagagatctccgattatcagaatcat
aataagtcaacaaatgccaaagaacagttatacgatagtgcgagtgatgttgaacaagat
aatgagaatggatacactgacggtgctgaagtcgttgacgtagaagacttggggaatata
gtcgggaaaatgaatgaaaagaaaaaagagggagtttccttagtaccaaaagaaatgatt
acacctttacttcggaaatcattgacaaaacaaggatacaaacttgttggttcccattca
ggtgttaagctatgtcgttggactaagtcaatgctacgcggtcgtgggggatgttacaaa
catactttttacggcatagaaagtcatcgttgtatggaaagcactcctagtttggcttgc
gcgaacaagtgcgtcttttgttggaggcatcatacaaatccggttggaacggaatggcgt
tggaaaatggacgagcccgatgatattgtcaacgaagccattaaaaagcactgtgatatg
ataaaacaattcaaaggtgttcctggtgtgaaagccgaacgtctcgaggaaggaatggca
gtcagacattgtgctctgtcgttagtcggcgaaccaatcatgtaccccaagatcaacgat
cttcttacattgcttcatggccgtggtatttcgtctttcctggtaactaatgcccagttt
cctgacgccatcagaaatcttctacctgtaacacagctttatgtgagcgttgatgcaagc
accagagaaagcttaaagaaaatagatcgacctcttttccgagatttttggtctagattt
ctggaaagccttcgagcgttagccgacaagggacaaaggactgtgtatcgactgacttta
gtcaaaggttggaatgctgaagaaataaaaggctacactgaacttgtgtctctaggaagg
cctgactttatcgaagttaagggagtgacttattgtggtgattcaaaagcatcgtcatta
actatgaagaatgttccatggcatgaggaagtgattggttttgtaaagcaactcacggat
gcattgccggattatgaaattgcttgtgaacatgaacactccaattgtcttcttattgct
aagaaaaagtttaaggtcgacgagaaatggcacacttggattgattattcaaagtttcat
tcattgatgaaaagataccaaaatacaaacggcctggcttcgtttacctccttagattac
atggaagctacgccttcttgggccgtttttggtgacgttaatagaggatttgacccaaac
gaagccaggtttaagcgtaaaggcaaaatgaaagatcatgctagtatttag
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