Xenia sp. Carnegie-2017 (soft corals): 124438305
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Entry
124438305 CDS
T08024
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xen01002
]
124438305
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124438305
Enzymes [BR:
xen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124438305
Peptidases and inhibitors [BR:
xen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124438305
Ubiquitin system [BR:
xen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124438305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
UN_NPL4
Cas_Cas4
Motif
Other DBs
NCBI-GeneID:
124438305
NCBI-ProteinID:
XP_046844316
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MAGSINSLVPLSSDENDSKNDVLCIVYDETSLTFDQRSKYNFNFPRSTSILELYKKTAEE
FGYDPESFLLVWKSAKAGHESEERELTDNVESLQLEEVCQPPEKKKHQFYLRKKNGNPPT
RVKPPAQDKKPVENAALEDNSISNMFEADSSNTTSSTSYYGPYNNTNSFNSCSDLSKSET
GYVGLVNQAMTCYLNSLLQTLYMTPEFRNAIYKWRYKGSQEEAEKSIPYQLQKLFVQLQF
SGKRAVETTDVTKSFGWDSSDAWQQHDVQELCRVMFDALETVFKNTDQAQLINHLYQGQL
KDYVKCLECEYESARIDKFLDIPLVIRPFGANVPHESVEEALDSFVNPETLNGNNQYKCD
KCDKLCDAHKGLKFCKFPYIMMLQLKRFAFDYNLLHRIKLNDRMSFPQLLNLNKYIYPND
ELLNLMDNDDNLSPKSDSPSSIETETDSGVSLTSSENDTSSEDALNDVSMDVNEGSAAGC
ADSDNFEENDCTQDMKGPEGSFVYKLFSIMIHSGSAIGGHYYAYIRSFEDDQWYSFNDQT
VSKITESDIERTFGGSYTSNKSYYSSTYSSSANAYMLIYRQIRPDNRIFLQENELPQHVK
KLVASLGKEELREKELKEFKHNMCKIKLFCFHEQCKMSSANFEIHKGKTLREATEKARDL
FDLEDVVSLENCRIVKYDEYNEHIELSYDGQEEWDMDAVLGGAHSIYRFDLLLEIKRDGE
EFPVYESGAVTIKAHLANVSENRVLPAFNVRVSWTDSLKTLQDSIRKKLQTSCEYIVMVW
ERHSSEFYELKPSSEKTLKDESFFKKNKIFVQCTDDEPGETLDEKLLQVLDYFSNSITLE
VHLPQDVYTTQQRVSEISIHKETTLGEFKRSLEQEMGCSSEMFKVFRVYSTNQETEMDRL
NDTFSIVPDKSKIRIKHGRALKTGEFRAKIFLFRLNEEQHTEFLIEIILSKRMKIYETKV
ALIEELTKSSKKTIPLERMRLRKKSWKSPGRVYQNHQVLDDVILTFSSCEFFVEELEGRE
PVESTNSIVYFVRRWRPSTYVLDALWELVLDSSATIDDLKAQMAHHDEINTENIEVAKGR
GSFPFSISTLDIHEDLEWNPEGDKLKHYPLMVTDDGAMFYYRDKTEELMELTEDKKKEIK
KAEDAKSLSSATKSSYKPKEKALKIYTDR
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcagggagcattaacagtcttgtacctttatcctctgacgaaaatgactcgaaaaac
gatgttctgtgtattgtttacgacgaaacttccttgacgtttgaccagcgttccaaatac
aattttaattttcctcgctcgacatctatcctcgaattgtacaagaaaacagcagaggag
tttggctacgacccagaaagcttcctgcttgtttggaaaagcgcgaaggcaggccatgaa
agcgaagaacgagaattgacagacaatgtagaaagcctacaactggaagaggtttgccaa
ccaccggaaaagaagaaacaccaattttatcttagaaaaaagaatggtaaccccccaact
cgtgttaagcctcctgctcaggataagaaacctgtggaaaatgctgcgctagaggacaac
agtataagcaacatgttcgaagctgattcttcaaatacaacgtcgagtacttcttactat
ggaccctataataacacaaattccttcaatagctgcagcgacctttccaaatcagaaact
ggctatgttggtcttgtcaatcaagcaatgacttgttacctgaacagtcttcttcaaaca
ttatatatgacacccgagtttaggaatgcaatatacaaatggagatacaaaggcagtcaa
gaggaggccgaaaaaagcattccttatcagctacagaaactattcgtacagctccaattt
agtggtaagagagctgtggaaacaactgatgtgacaaagagttttggatgggacagcagt
gatgcctggcaacaacacgacgtgcaggagttgtgccgagttatgtttgatgctttggaa
acggtctttaagaatacggatcaggcacaactcatcaaccatctttaccaaggacagttg
aaagattatgtcaagtgcctggagtgtgaatacgaaagtgcaagaattgacaagttttta
gatattcctctggtcataagaccgtttggtgccaatgtccctcacgagagcgtggaagaa
gccctggattcatttgtaaacccagagacacttaatggaaacaatcagtacaaatgtgac
aagtgcgacaagctttgcgacgcacacaagggtctaaaattctgcaagttcccgtacatc
atgatgctgcaattgaagcggttcgcgttcgactacaatctcctacatcgcattaaactg
aatgacaggatgtcatttccacaacttctaaatctcaacaaatatatttatcccaacgac
gaattgctaaatttaatggacaatgacgacaatctttccccgaaaagtgattcgccgagc
tccattgagactgagacggacagcggtgttagcctgacgtcatcggagaacgatacctcc
tcagaggatgctctcaatgacgtgtcaatggacgtgaacgaggggtctgccgccggctgt
gccgattcagataactttgaagaaaatgattgtacacaagacatgaaggggcctgagggg
tcgtttgtgtataaacttttctccatcatgatccattcgggaagcgccattggaggccat
tattacgcttacataaggtcttttgaggatgatcaatggtatagtttcaatgatcaaacg
gtgtccaagataaccgaaagcgatatagagcgtacatttggtggatcttacacgtctaac
aaaagttattattcatcaacatattcaagctctgcaaacgcatacatgttgatctatcgt
caaatacgcccagacaaccgtatttttttacaagagaacgagctgccacaacacgtaaaa
aagctggtcgccagtctgggtaaggaagaactacgagagaaagaactcaaggaatttaaa
cacaacatgtgtaaaatcaagcttttctgttttcacgaacaatgcaaaatgtcgagcgca
aacttcgagattcacaaggggaaaacgctaagagaagctacggagaaagcccgagacctg
ttcgatctggaggatgtggtatctttggagaactgtcgaattgtaaagtacgacgaatac
aacgaacacatagagctatcctacgatgggcaagaagagtgggatatggacgcggtatta
ggcggagctcactcgatatatcgctttgatcttttgctcgaaataaaacgcgatggagag
gaatttcctgtttacgaatctggagctgtaacgatcaaggctcatttggcaaacgtttca
gagaatcgcgttcttcccgccttcaacgtgcgcgtttcgtggacagatagtttgaaaact
ctccaggacagtataagaaagaagcttcagacatcatgcgagtatattgtcatggtgtgg
gagagacattcttcggaattctacgaactgaagccgagttccgagaaaaccttaaaagac
gagagttttttcaaaaagaacaagatatttgttcagtgtacggatgatgaaccgggtgaa
actctggatgaaaaattattacaagtattggattatttctcaaattctattacgctggaa
gtccatctgcctcaagatgtatataccacgcaacaacgtgtttcggagatcagcattcat
aaggaaacgactttgggcgaatttaaacgtagtttggaacaggaaatgggctgctcgtcg
gaaatgttcaaggtatttcgcgtatattccacgaatcaagaaacggaaatggatcgtttg
aacgacaccttttccattgttcccgacaaaagcaagatacgtatcaaacatggacgtgca
ttgaaaacaggagaatttagagcgaaaattttcttgttcagactcaacgaagagcagcac
acggagtttctaatcgaaattattctttcaaaacgtatgaaaatttacgagacaaaagtc
gcgcttatcgaagaattgactaaaagttcaaaaaagacaattccactagagcgcatgaga
ctgcgcaagaaatcgtggaaatcacctggtcgcgtttatcaaaatcaccaggtgttagac
gacgtcatattgactttcagctcatgcgagtttttcgtcgaggaactggaaggaagagaa
cctgtcgagagtacgaatagcattgtatacttcgttcgaagatggcgtccttccacgtac
gtacttgatgcattgtgggaacttgtgttggattcatcagccacaatcgacgatctcaaa
gcacagatggctcatcacgatgaaataaataccgaaaacattgaagtcgccaaggggcgc
ggttcattcccgttttcgatttctactctcgacattcatgaagatttggaatggaatccc
gaaggcgataaattaaaacattatcctctgatggttactgacgacggtgccatgttctat
tacagggataaaactgaagaattgatggaactgacggaagataaaaagaaagaaataaaa
aaggcagaggacgctaaatcactttctagtgctactaaatcgtcgtacaaaccaaaggaa
aaagctctgaagatatacactgatagataa
DBGET
integrated database retrieval system
