Xenia sp. Carnegie-2017 (soft corals): 124443350
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Entry
124443350 CDS
T08024
Name
(RefSeq) WD repeat-containing protein 3-like isoform X1
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124443350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124443350
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124443350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
RMC1_N
WDR54
WD40_like
PQQ
Utp13
Motif
Other DBs
NCBI-GeneID:
124443350
NCBI-ProteinID:
XP_046849807
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MVLTKSYLRYVEAGIFGVVGSARANLCLVQSGEKRREICRAIVPALENVYIWDARLGEKV
NVLQGNKSEVTCLCLSPDSEHLAVGYGDGVIRIWNINNGTSSVTFSGHKTAVTALNYDYT
GVKLVSGSKDTDVIVWDIINDSGMFRLKGHKGMVTCCRFLHFQNVLITSSKDTFVKFWDL
DSQHCFLTLVGHKTEVWGFVVVKNETRLITSCADSELRVWKIEDKDDRTEKRDETRKRKT
ATQSSEDGVGEIEELLSCTIIGSVMKSSTDRVVSLYCDLSRTYIGCHGANSTLEMFRLAS
EDEIKKRLAKRRKKILKKQRSQGLEADELTVSENVLATVEDEIIKLPDVKATSKIRSFDF
ALNSNNDLKISLLLHNNSVEFHVFSEEKKDSTNILSIKTPGHRSDVRTLSFNSDDSCILS
GAAESVKLWNRSTQKCIRTMSSGYCLSSFFVPGDRHVVVGTKAGKLQIFDVSSGSLLETV
DAHDGAIWSLCLAPDNTLFASGSGDKDVKFWEFDLITDENYSTTSQRLSICHARTLKMND
DVMCVKFSPNQKFIAVALLDFTMKIFFTDTLKFFLSLYGHKLPVVTMDISTDNVLLVSGG
VDKNIKIWGLDFGDCRKSIFAHDDSVMAVQFVPKTHYFFSASKDKTIKYWDADRFLHVTT
LEGHHSEIWSLAISHDGEFVISGSHDKSLRLWERTDEPLFVEEEREMEREAAYEESAVTG
VETIIPGEQDTEAVKAGKKTIETIKGAERIMEAIELYKEERQKELEHKASQVTKDKTLPK
RAIHPILSVFGNVSPVQYVLLVVKKVKSSELEESLLVLPFDYVIDVLKLLLEWIKNGWET
ELSCRCLFFLLRIHHNKIIATPELLPVIDSIRSHCRSRVREMKDTVGFNLAGLQFIQRQL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggtcttaacaaaatcgtatctgcgttacgtcgaagctggaatatttggcgtagtggga
agtgctagagctaatttgtgtcttgttcaaagtggcgagaaaagacgtgaaatttgccgc
gcgattgttcccgcactagaaaatgtatatatttgggacgctagacttggcgaaaaagtg
aatgtcttacaaggtaacaagagcgaagtgacatgtctctgcctcagtcctgactctgaa
catcttgctgttgggtatggcgatggtgtcatcagaatttggaatataaataatggtaca
tcctcagtgacatttagtggtcacaagacagcagttacagctcttaactatgattatact
ggtgtcaaattggtgtctggatcaaaggatacagatgtgattgtttgggatataattaat
gactcaggaatgttcagacttaaaggtcataaaggaatggtgacttgttgtcggtttctt
cattttcaaaatgttcttataactagttccaaagacacttttgtgaaattttgggatctt
gattcacagcattgttttcttaccttggttggtcataaaacagaggtttggggctttgtc
gtcgtcaagaatgaaacaaggttaattactagttgtgctgatagtgaattgagagtttgg
aaaattgaggacaaagatgatagaacagaaaaacgcgacgaaacgagaaaacgaaagaca
gcaacgcaatctagcgaggatggtgtaggggaaatagaggaattgctttcgtgtacaata
attggctctgtcatgaaaagctcaactgatcgcgtagtgtcgctgtattgcgatctttca
cgaacttatattggctgtcatggtgctaattctacgttagaaatgtttcgtcttgcatca
gaagacgaaataaaaaaacgcttggcaaagagacgaaaaaagattttaaagaagcaaaga
tcacaaggattggaagccgacgagctgacggtttctgaaaacgtcttagccaccgtcgaa
gacgagattataaaattacccgatgttaaagcgacctcaaagataaggtcatttgacttt
gcattgaattcaaataatgatctaaagatttcattattactacacaacaacagcgtagag
tttcatgtcttcagtgaagaaaagaaagattcaactaatatactttccataaagacacct
ggtcatcgtagtgatgtaaggactttgtcattcaattctgacgattcctgcatcctctct
ggcgcagctgaaagtgttaaattgtggaacagatcgactcagaaatgcatcagaacaatg
tcttctggttattgtctaagttcgttttttgtacctggtgacagacacgttgttgttggt
actaaggctggcaaactccaaatatttgacgtttcgtctggttcattgcttgaaactgtg
gacgcacacgatggtgctatttggtcgttgtgtttagctcccgataatacgctattcgcc
tcaggaagtggtgacaaggatgtaaaattttgggaatttgatttgattacggatgagaac
tattcaacgaccagtcaaagattaagtatttgtcatgcacgaacattaaaaatgaatgat
gacgtaatgtgtgtaaagttcagtccaaatcaaaagtttattgccgtggctttgcttgat
tttacaatgaaaattttcttcactgatacattgaagttcttcctatccctctatggtcat
aaattacctgttgttaccatggatatatcaacggataacgttctcctcgtttctggtggc
gttgacaagaacattaagatttggggtttggattttggtgattgtcgaaaatcaatattc
gcccatgatgacagtgtcatggccgtgcagttcgtgccgaaaactcattatttcttcagt
gcaagtaaagataaaacgataaaatattgggacgctgacagatttcttcatgttacgacc
ttagaaggtcatcattcagaaatatggagtcttgcaatcagccatgacggcgagtttgtt
atcagtgggtcacatgataaatcattaagactctgggaacgaacggacgaaccgttgttt
gtcgaagaggagagagaaatggagagggaagctgcttacgaagaaagcgccgtaacagga
gttgaaacaattattccaggtgaacaagacacagaagctgttaaagctggcaagaaaact
atcgagacgatcaaaggagctgaaagaatcatggaggccattgaattgtataaggaagaa
agacagaaagaacttgaacataaagcgagtcaagtgacgaaagacaaaacgcttccaaag
cgcgccattcatccgattctttctgtctttggtaatgtcagtcctgtacagtatgtactt
ctagtggtgaaaaaagtaaagtcaagcgaacttgaagaatcattgcttgtgttaccgttt
gactatgttattgatgtactgaaacttcttcttgagtggattaagaatggttgggaaaca
gagttaagttgtcgatgtctgttctttctactgcgaatacatcacaacaagatcatagcc
actcctgaactactgccagtaatagactctatcagatcacattgtcgtagccgagttcgc
gaaatgaaggatactgttggattcaatttggcgggactacagtttattcaaagacagctt
tag
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