Xanthomonas euroxanthea: XSP_002749
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Entry
XSP_002749 CDS
T07902
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xeu
Xanthomonas euroxanthea
Pathway
xeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XSP_002749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xeu03019
]
XSP_002749
03009 Ribosome biogenesis [BR:
xeu03009
]
XSP_002749
Enzymes [BR:
xeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
XSP_002749
Messenger RNA biogenesis [BR:
xeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XSP_002749
Ribosome biogenesis [BR:
xeu03009
]
Prokaryotic type
rRNA helicases
XSP_002749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
adh_short
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CAD1793767
UniProt:
A0A381LT37
LinkDB
All DBs
Position
1:complement(3262005..3263930)
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AA seq
641 aa
AA seq
DB search
MTQESPAPLLFADLGLSDAVMKAVAAVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKT
AAFALPVLSNADLNQLKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQ
QLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKL
PEKRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIRQRYWWVSGLHKLDALT
RILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQAAREKTIAQLKDGKLD
ILVATDVAARGLDVERVSHVLNYDIPYDTESYVHRIGRTGRAGRNGDAILFVTPREKGML
RSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAGGQIEMYRDLLQRYESENNVP
AIDIAAAMAKLLQGDAPFLLTPPVRGAREEFAPRERNDRGDRGERPRFEPKFERGPRADG
ERAARPPRAERPAFADDGAGAERPRRDPVAPRGEPEFGMESYRIEVGHTHGVKPANIVGA
IANEAGLESRYIGRIDIQDDYSILDLPADMPRELLTHLKKVWVSGQQLNMRKLEDGEAAA
APSRPRFPRGGKPSGRPNGPNRPMDRAGAPHRKGPPKPRGE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagaatctcccgcgccgctgctgtttgcagacctcggcctctcagacgctgtg
atgaaggcggttgccgccgtcggctacgagtcgccgtcgccgatccaggccgccaccatt
cccgcgctgctggccggccgcgacgtgctcggccaggcgcagaccggcaccggcaagacc
gccgcgttcgcgctgccggtgctgtccaatgccgacctcaaccagctcaagccgcaggcg
ctggtgctggccccgacccgcgagctggccatccaggtcgccgaggcgttccagaaatat
gccgaagccattcccggcttccgcgtgctgccggtctacggcggccagccctacgcgcag
cagctgagcgcgctcaagcgcggcgtgcatgtggtggtcggcactccaggccgggtgatc
gatcacctggatcgtggcacgctggacctgtcccagctcaagacgctggtgctggacgaa
gccgacgaaatgctgcgcatgggcttcatcgacgacgtcgaagcggtgctgaagaagttg
ccggagaaacgccaggtggcgctgttctcggcaaccatgccgccggcgatccgccgcatc
gcgcagacctatctgaaagacccggccgaagtcaccatcgcggccaagaccaccacctcg
gccaatatccgccagcgctactggtgggtgagcggcctgcacaagctggacgcgctgacc
cgcatcctggaagtcgagccgttcgacggcatgatcatcttcgcgcgcaccaaggccgcc
accgaagagctggcgcagaagctgcaggcacgtggcatggccgcggcggccatcaatggc
gacatgcagcaggccgcccgcgagaagaccatcgcccagctcaaggacggcaagctcgac
atcctggtcgccaccgacgtggccgcgcgcggcctggacgtggagcgcgtcagccatgtg
ctgaactacgacatcccgtacgacaccgaaagctacgtgcaccgcatcggccgtaccggc
cgtgccggccgcaacggcgacgcgatcctgttcgtcaccccgcgcgagaagggcatgctg
cgttcgatcgagcgcgccacccgccagccgatcgaagagatgcagctgccgagcgtggat
gcggtcaacgacacccgcgtggcacggttcatgacccgcatcaccgagaccctggccggc
ggccagatcgagatgtatcgcgatctgctgcagcgctacgagagcgagaacaacgtgccg
gcgatcgatatcgccgcggcgatggccaagctgctgcagggcgatgcgccgttcctgctg
accccgccggtgcgtggcgcacgcgaggagttcgccccgcgcgagcgcaatgatcgcggt
gatcgcggcgagcgtccgcgcttcgagccgaagttcgagcgtggcccgcgtgccgatggt
gagcgcgcggcacgcccgccgcgtgcggaacgtccggccttcgccgatgatggcgccggt
gccgagcgtccgcgtcgcgacccggttgccccgcgcggcgagccggagttcggcatggag
agctaccgcatcgaagtgggccacacccacggcgtgaagccggccaatatcgtcggtgcg
atcgccaacgaagccggcctggaaagccgctacatcggccgtatcgacatccaggacgac
tattcgatcctggacctgccggccgacatgccgcgcgagctgctgacgcacctgaagaag
gtctgggtgtccggccagcagctcaacatgcgcaagctggaagacggcgaggcggctgca
gcgccgtccaggccgcgcttcccgcgcggcggcaagccgtccggccgcccgaatggcccg
aaccgtccgatggaccgtgccggcgcgccgcatcgcaagggcccgcccaagccccgcggc
gagtaa
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