Xylella fastidiosa Temecula1: PD_0210
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Entry
PD_0210 CDS
T00113
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00521
Streptomycin biosynthesis
xft00523
Polyketide sugar unit biosynthesis
xft00541
O-Antigen nucleotide sugar biosynthesis
xft01100
Metabolic pathways
xft01110
Biosynthesis of secondary metabolites
xft01250
Biosynthesis of nucleotide sugars
Module
xft_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PD_0210 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PD_0210 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PD_0210 (rfbD)
Enzymes [BR:
xft01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PD_0210 (rfbD)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AAO28101
UniProt:
Q87ET8
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All DBs
Position
267360..267917
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AA seq
185 aa
AA seq
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MKVIDTALPGCLVIEPRVFDDARGEFFEVWNAECFEHQGMSSRFVQSNVSISIYGVLRGL
HYQWPRPQGKLVGVLEGEVYDVAVDIRRGSPHYGRWVAVLLSAKNKRQLWIPEGFAHGFV
VLSERAVFNYLCTDVYVKEADAGIRWNDAVIGVDWPIAAPLLSAKDQKAPFMEEVPIDRL
PIYVP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtgattgatacggcgctgccaggctgtttggtgattgagccgagggtgtttgat
gatgcgcgcggtgaattttttgaggtatggaatgcggagtgtttcgagcaccaggggatg
tcatcgcgctttgtgcagagtaacgtgtccatatcaatttatggtgttttgcgtggtttg
cattatcagtggccgcgtccgcaggggaagttggtcggtgtgttggagggtgaggtttac
gatgttgctgttgatatccgccgtggctcgccgcattacgggcgttgggtagcggtgttg
ctcagtgccaaaaacaagcgccagttatggattccggaagggtttgcgcacgggtttgtg
gtgttgtctgagcgtgcggtattcaactatctgtgtacggatgtgtatgtgaaggaggcc
gatgctggcatccgttggaatgatgcggtgattggtgtggattggccgattgctgcgccg
ctgctctcggctaaggatcagaaagcgccgtttatggaggaagtccctattgatcgtttg
ccgatatacgtgccgtga
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