Xanthomonas citri pv. fuscans: XFF4834R_chr04230
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Entry
XFF4834R_chr04230 CDS
T03094
Symbol
glgX1
Name
(GenBank) probable glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00500
Starch and sucrose metabolism
xfu01100
Metabolic pathways
xfu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
XFF4834R_chr04230 (glgX1)
Enzymes [BR:
xfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
XFF4834R_chr04230 (glgX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
GlgX_C
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
CDF60088
LinkDB
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Position
482721..484883
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AA seq
720 aa
AA seq
DB search
MATRKFTQRSRIREGRPNPLGATWDGLGVNFALYSRNATRVELCLFDDRGREQERIALPE
YTDEVWHGYLPDARPGQLYGYRVHGPYAPDAGHRFNHNKLLLDPYAKQIVGELKWAPHLF
GYTIGHRDKDLSFDRRDSAAFMPKSAVIDPAFTWGQDRPPQTPWNRTVIYEAHVRGLSML
HPAVPPEERGTFSALKTDELIDHISSLGVTAVELLPVHAFVDDQYLLEKGLRNYWGYNTL
GFFAPQARYMSTRTVAEFKQMVARLHHAGLEVLLDVVYNHTAEGNELGPTLSFKGIDNAS
YYRLADDRRFYINDTGTGNTFDLTNVGALRMVMDSLRYWVQEMHVDGFRFDLASILGRER
YGFDPSGSFLDAVRQDPVLSQTKLIAEPWDIGPGGYQVGNFPPGWVEWNDKFRDNVRAFW
RGDGGQLAELATRLTGSADLFDHSGRRPTASVNFVTAHDGFTLRDLVSYEGKHNLANGED
GRDGSDHNISSNYGVEGETNDPAIKQLRRQQMRNLLATLLLSQGTPMLLAGDEFGHSQNG
NNNAYCQDNELTWIDWTAATKAAAADQAAFVRRLIRIRQRYPLLHRARFFDGKFDEALGL
KDLTWLAPNGTEMDEAGWHDPEARALMLRLDGRSPTTGLREIAANVTLLMLINAASTAVS
FTLPAMHDEHWRVLVDTARHGGRVVAGGSEWKAPAHSLTLLAVERDRIVSSARIVSEGAR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggccactcgcaagttcacccagcgctcgcgcattcgcgaaggccgtcccaacccgctc
ggcgccacctgggatgggttgggcgtcaacttcgcgctgtattcgcgcaatgccacccgg
gtggagctgtgcctgttcgacgatcgtggccgcgaacaggagcgcattgcgctccccgaa
tacaccgacgaggtctggcacggttatctgcccgatgcacgccctggccagttgtacggc
taccgcgtacacggcccatatgcgcccgatgccgggcaccgcttcaatcacaataaattg
ctgttggacccgtatgccaagcagatcgttggcgaactcaaatgggcgccacacctgttc
ggctacaccatcggtcatcgcgacaaggatctgagcttcgaccgccgcgacagcgccgcg
ttcatgcccaagtctgcggtgatcgacccggccttcacctggggccaggaccgcccgccg
cagaccccgtggaaccgcacggtgatctacgaagcgcatgtacgcggcctgagcatgttg
cacccggcggtgccgccggaagagcgcggcaccttctcggcactgaaaaccgacgaattg
atcgaccacatcagttcgctcggcgtcaccgcagtggaattgctgccggtacatgcattc
gtcgacgatcaatatctgctggaaaaaggcctgcgcaattactggggctacaacacgctg
ggcttttttgcgccgcaggcgcgttacatgtccacgcgcaccgtggccgagttcaagcag
atggtagcgcgcctgcatcacgccggcctggaagtgctgctggacgtggtctacaaccac
actgccgaaggcaacgagctcgggcccacgctctcgttcaaggggatcgacaacgccagc
tattaccgcctggccgacgatcgccgcttctacatcaacgacaccggcaccggtaacacc
ttcgacctcaccaatgtcggcgcgctgcgcatggtgatggattcgctgcgttactgggtg
caggaaatgcacgtggacggcttccgtttcgatctggccagcatcctgggccgcgaacgc
tatggcttcgatccgtccggcagtttcctggatgcggtgcgccaggacccggtgctcagc
cagaccaagttgatcgccgagccgtgggatatcggacccggcggttatcaggtcggcaac
ttcccgccgggctgggtggaatggaacgacaagttccgcgacaacgtgcgcgcgttctgg
cgcggcgacggcggccagctggccgagttggccacgcgcctcaccggttctgcggacctg
ttcgatcacagcggccgccgcccaaccgcatcggtcaatttcgtcaccgcgcatgacggc
ttcaccctgcgcgatctggtcagctacgaaggcaagcacaatctcgccaacggcgaagac
ggcagggacggcagcgaccacaacatttcgtccaactatggcgtggaaggcgagaccaac
gacccggcgatcaagcagctgcggcgccagcagatgcgcaacctgctcgccaccttgctg
ttgtcgcagggcacgccgatgctgctggccggcgatgagttcggccatagccagaacggc
aacaacaacgcctattgccaggacaacgagctgacctggatcgactggaccgccgccacc
aaggcggccgccgccgaccaggccgcattcgtgcgccgattgattcgtattcggcagcgc
tacccgctgctgcatcgcgcgcgtttcttcgacggcaagttcgatgaagcgctgggcctg
aaggatctgacctggctcgcgcccaatggcaccgagatggatgaagccggctggcacgac
ccggaagcgcgcgcgctgatgctgcgtctggatggccgctcgccgaccaccggcctgcgc
gagattgccgccaacgtgacgctgttgatgctgatcaatgccgcctccaccgccgtgtcg
tttacgctgccggccatgcacgacgaacattggcgcgtgctggtggacaccgcacgccac
ggcggccgcgtggtggccggtggcagcgaatggaaggccccggcgcattcgctgacgctg
ctggccgtggagcgcgaccgcatcgtcagcagtgcgcggatcgtctccgaaggagcgcgc
tga
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