Xanthomonas citri pv. fuscans: XFF4834R_chr34770
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Entry
XFF4834R_chr34770 CDS
T03094
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00521
Streptomycin biosynthesis
xfu00523
Polyketide sugar unit biosynthesis
xfu00541
O-Antigen nucleotide sugar biosynthesis
xfu01100
Metabolic pathways
xfu01110
Biosynthesis of secondary metabolites
xfu01250
Biosynthesis of nucleotide sugars
Module
xfu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XFF4834R_chr34770 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XFF4834R_chr34770 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XFF4834R_chr34770 (rmlC)
Enzymes [BR:
xfu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XFF4834R_chr34770 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CDF62909
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Position
complement(4033210..4033767)
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AA seq
185 aa
AA seq
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MKVIDTSLPGCFVIEPRVLGDERGQFFEAWNAERFDQHGFSARFLQSNISTSTKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPYFGQWTAAILSAENNRQFWIPEGFAHGFA
VLSERAVFSYLCTDIYVHDADASVRWDDATIGVDWPISSPILSAKDRAAPFLEDIAEERL
PVYQG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtcattgacacgtccttgcccggttgcttcgtcattgagccaagagtcctgggc
gacgagcggggtcaattcttcgaagcctggaatgccgaacgcttcgaccagcacggattt
tccgcgcggttcctgcagagcaatatctccacttcgaccaagggcgtgctgcgaggtctg
cactaccaatggccacggccgcaggggaagttggtcagcgtgctggagggcgaggtctac
gatgtggcggtggatatccggcgcggatcaccgtacttcggtcagtggactgccgccatc
ctgagcgccgagaacaatcggcagttctggattccggaaggttttgcgcatggctttgca
gttctgtccgaacgtgcggtcttcagttacctgtgcaccgacatctacgtccatgacgcc
gacgcaagcgtgcgctgggacgacgccaccatcggtgtggattggccgatcagttcgcca
attctgtctgcaaaggatagggctgcgccgtttcttgaggatatcgccgaagagcgcctg
ccggtttatcagggatga
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