Xanthomonas citri pv. fuscans: XFF4834R_chr42170
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Entry
XFF4834R_chr42170 CDS
T03094
Name
(GenBank) putative hemagglutinin-related protein, Type V secretion pathway
Organism
xfu
Xanthomonas citri pv. fuscans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
SprB
Big_9
Cadherin_5
NtrZ
Chlam_OMP6
Motif
Other DBs
NCBI-ProteinID:
CDF63599
LinkDB
All DBs
Position
complement(4903506..4908293)
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AA seq
1595 aa
AA seq
DB search
MYTNCTGAGSVRLALRWLMAVMLLATSHVAMAAYCTSPQSATVNSGGSVTFDVSNCDGPD
NFGMSDGAQPSHGSYVLTGQLDGAGTERVTYTNNGDGATSDSFYLLDQDNGQVVFNITIN
PSRTASIAVSPSAANEDSGTSFVYTVTLSQTNTSATTVNLTRSGTATSGTDYSGAATSVV
VPANTSSASFAVTPIADTTVEADETVTFSVASGTGYSTGSPASATATIVNDDFPVASIAV
SPASVTEDGATNLLYTVTLDQPSLSALSIGFGVSGTATSGTDYAAVSSPLVIAAGQTTGT
ITINPTADTTVEPDETVVISLNTGSGYTVGSPNSATGTILNDDLPVLSINDVSVNEGNAG
TTNATFTVSLSAPAGAGGVSFDIATADGTATAGVDYVASSLTGQTIPAGSSSATFTVLVN
GDTLAEPNETFFVNVSNVTGATVSDGQGLGTIVNDDAQPALSIDDVSVNEGNSGTTTATF
TVSLSAASGQTVTVNYATADGTATAGSDYVARSGTLTFAPGVTAQGVAVTVNGDTAVEPN
ETFSVGLSGASNATIARATGTGTILNDDAVVTISPASLPAATAGSAYSQTLTASGGTPGY
TFVVSAGALPAGLTLSASGVLSGTPTASGSFNFTATATDSGTPTSGSRAYTLTVAGATVI
LPATTLPAGTAGQAYSSAITPATGGIAPYSYALTAGALPAGITLNSSSGALSGTTTSVGS
FSFTVTATDSTSGTPSQGTRGYTLNIAAPTIAVAPSTVPTATRGTAYSQTLTASGGTAAY
TYAITSGALPAGITLASNGTLSGTATVEGTFNFTVQATDANSFTGTQAYSLTVAGPNLVL
PASALPAGTAGQAYAAAITPATGGTAPYSYAVTAGALPGGVVLDAATGGLSGTPTVSGTF
TFTLTVTDSTPSPAAQASRSYSLTINAATLVLAQPTLPAAVRGTAYNQVLTASGGIAPYR
YSIASGALPAGLTLASDGTLSGTPTVQGTSSFTIAVADAGNASATQAYTFTVNDAAPVAV
ADVAATMTDTAVTAAVTANDTGSITAIAIASAPTNGTAVVNGLEVVYTPNAGFAGTDVLS
YTASGAGGTSAAVTLTITVNVRPVAVSVTAAAVPGEAQQVDITRNATGGPFVAAAVVAVL
PASAGTAIITRVGGTASAAAARASGLSPAATAMAETPTFTLTFTPNPAFVGQATVQFTLS
NAFATSAPATVVFNIAPRRDPSVDAEVRGLIDAQSESTRRFARAQIDNFQRRLEATHRGG
GSFTNAVSFQPTSHCRQADRGISAQPCSPDTQDADNDFRDAPAATGSTGSTGSSAQTQGD
LGLWVGGAIRSGSLNRQTNSNGVDFQTDGLSVGADYRVAPSLAIGAGLGWGRDDSDVGSN
GSHSKATAYTMALYASFHPGKAFFFDTLVGYQLLSYDLRRFVTDDSSLAEGNRDGKQWIA
SLSTGADLQRGTLQITPYARVDVARATLDGYVEEGVAPFALRYADMDVATTTGNLGLRLE
WRREVAWGRLTPQLRVEYQRDFQGRGDAILSYADLTGGPFYRTAQSAFDRNRLMVGIGAA
LLTEQGLSTRLEYRGITDGDSNNDQTWMINLEKKY
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgaattgcaccggcgcgggcagcgtgcgcctggccctacgttggctgatggcg
gtgatgctgttggcgacctctcatgtcgcgatggccgcctattgcaccagtccacagagc
gcaaccgtcaattccggagggtcggtgacgttcgacgtcagtaactgcgatggccccgac
aacttcggcatgagcgatggtgcacaaccgtcgcacggtagctacgtcctcaccggtcag
ctcgatggcgcaggcactgagcgggtgacatacaccaacaacggggacggcgcgacgtcg
gactcgttctatcttctggaccaggacaacggccaggtcgtcttcaacatcaccatcaac
ccttcgcggacggccagcatcgcggtcagcccgtccgccgccaacgaggacagcggtacg
tccttcgtctacacggtgacgctgagccagaccaacacctcggcgaccacggtcaacctg
acgcgcagcggcaccgcgaccagcggcacggactactccggcgccgcgaccagcgtggtg
gtgccggccaataccagctcggccagcttcgccgtcaccccgatcgccgacaccacggtg
gaagccgacgaaacggtgaccttcagcgtcgccagcggcaccggttattccaccggcagc
cccgccagcgccaccgccaccatcgtcaacgacgattttcccgtcgcctcgatcgcggtg
tccccggccagcgtgaccgaggacggcgccaccaacctcctctacacggtcaccctggac
caaccgtccctctcggcgctgtccatcggctttggcgtgagcggcaccgcgacctcgggc
accgactatgcggcggtgagttcgccgctggtgatcgccgccggccagaccaccggcacc
atcaccatcaatccgaccgccgacaccactgtcgagcccgacgaaaccgtggtgatcagc
ctcaacaccggcagtggctacacggtcggttcgccgaacagcgccaccggcaccattctc
aacgacgacctgccggtgctgtcgatcaacgatgtctcggtgaacgaaggcaatgccggc
accaccaatgccaccttcaccgtgtcgttgagcgcgccggccggcgccggcggcgtcagc
ttcgatatcgccactgccgatggcaccgccactgcgggtgtggactatgtcgcctccagt
ctgaccgggcagaccatccccgccggcagcagcagcgccaccttcaccgtgctggtcaac
ggcgacacgctggccgagccgaatgaaacgttcttcgtcaacgtcagcaacgtcaccggt
gccaccgtgagtgacgggcagggcctgggcacgatcgtcaacgacgacgcgcagccggcg
ctgtcgatcgacgatgtgagcgtcaacgaaggcaacagcggcaccaccacggccaccttc
acggtgagcctgagcgctgccagcgggcagacggtcacggtcaactacgccaccgccgac
ggcaccgccaccgccggcagcgactatgtcgcgcgctccggcacgctgaccttcgcgccg
ggcgtgaccgcgcaaggcgtggcggtcaccgtcaatggcgataccgcggtcgagcccaac
gaaaccttcagcgttggcctgtccggcgccagcaatgcgaccatcgcccgcgccaccggc
accggcaccatcctcaacgatgatgcggtggtgacgatctcgccggcgtcgctgcccgca
gcaactgcaggcagcgcgtacagccagacgctgaccgccagcggtggcaccccgggctac
accttcgtggtcagtgctggcgcgttgccggccggactgacgttgagcgcaagcggtgtg
ctgtccggcacgccgaccgccagcggcagcttcaacttcaccgcaaccgcgaccgacagc
gggacgccgaccagcggcagccgtgcctacacactgaccgtggccggcgccaccgtgatc
ctgccggccaccacgctgccggccggtaccgcgggccaggcctattcgagcgcgatcacg
ccggccaccggcggtattgcgccctacagctacgcactcaccgccggcgcgctgcccgcc
ggcatcacgctcaacagcagtagcggggcgttgagcggcaccaccaccagcgtgggcagc
ttcagcttcaccgtcactgcgaccgacagtaccagcggcacgccttcgcagggcacgcgc
ggctacacgttgaacatcgccgcgccgacgattgcggtggcgccgtccacagtccccacc
gcgacacgtggcacggcctacagccagacgttgactgccagcggcggcacggcggcctac
acctacgcgatcaccagcggtgcattgccggccgggatcaccttggccagcaacggcacc
ttgtccggcacggcaacggtggaaggcacgttcaatttcaccgtgcaggccaccgacgcg
aacagcttcaccggcacacaggcatacagcctgaccgtggctggcccgaacctggtgttg
ccggcatccgcgttgccggcaggcacggctgggcaagcctatgcagccgcgatcacgccg
gccaccggcggcactgcgccgtacagctatgccgtcaccgccggcgcgctgccgggtggc
gtggtactggacgctgcaaccggcggcctcagcgggacaccgacggtgtcgggtaccttc
accttcaccctgacggtcaccgacagcacgcccagccccgccgcgcaggccagccggagc
tactcgctgaccatcaatgccgcaacgctggtgctggcgcagcccaccttgccggcggcc
gtgcgtggcaccgcctacaaccaggtgctcaccgccagcggcggcattgcgccgtaccgc
tacagcatcgccagtggcgcgttgccggccggattgacgctggccagcgacggcacgctg
tcgggcacgccaacggtacagggcacctcgtccttcaccattgcggtggcagatgcgggc
aacgccagcgccacgcaggcctacaccttcacggtgaacgatgcagcgccggtggcggtg
gccgatgttgccgccaccatgaccgacaccgccgtcaccgcagcggtcaccgccaacgac
accggcagcatcaccgcgatcgccattgccagcgcgcccaccaacggcacggccgtggtc
aacgggctggaagtggtctacacgccgaacgccggctttgccggcaccgacgtgctgagc
tataccgccagcggcgcaggtggcacctcggcagcggtgacgctgaccatcacggtcaac
gtgcggccggtggcggtgtcggtgactgcagcggcagtgccgggcgaagcgcaacaggtg
gacatcacccgtaacgcaaccggcgggccgttcgtggctgctgcggtggttgcggtgttg
ccggcctcggccggtaccgccatcatcacccgcgtgggcggcaccgccagtgcggcggcg
gcgcgtgcctccggcctgtcgcctgcagccactgcaatggccgagacgccgacctttacg
ctgacctttacgcccaacccggccttcgttggccaggccacggtgcagttcaccttgtcc
aacgcattcgccacctcggccccggccactgtggtgttcaacatcgcgccacggcgcgac
ccgagcgtggatgcggaagtgcgtggcctgatcgatgcgcagtccgagtccacgcgacgt
tttgcgcgggcgcagatcgacaacttccagcgccgtctggaggccacgcatcgcggcggc
ggcagcttcaccaacgcagtgagcttccagccgacctcgcattgccgccaggccgaccgc
ggcatcagtgcgcagccgtgcagcccggacacgcaggacgccgacaacgacttccgcgat
gcgcccgcggcgaccggcagcaccggcagcaccggcagcagcgcgcagacgcagggcgac
ctggggctgtgggtgggcggcgcaatccgctcgggcagcctgaaccggcagaccaacagc
aacggtgtggatttccagaccgatgggttgagcgtgggtgccgactaccgtgttgcgccg
tcgctggcgatcggtgcgggcctgggttggggccgggacgacagcgatgtgggcagcaac
ggcagccatagcaaggccaccgcctacacgatggcgttgtatgccagcttccatccgggc
aaggcgttcttcttcgacaccttggtcggctaccagctgctgtcttacgacctgcgccgc
ttcgtcaccgatgacagctcgctggccgagggcaaccgcgacggcaagcagtggatcgcc
tcgctgtccaccggcgccgacctgcaacgcggcacgctgcagatcaccccgtacgcacgt
gtggatgtggcacgcgccaccttggacggctatgtggaagaaggcgtggcaccgttcgcg
ctgcgctatgccgacatggatgtggccaccaccaccggaaatctcggcctgcgtctggaa
tggcgtcgcgaggttgcctggggacggctgaccccgcagttgcgcgtggagtatcagcgc
gacttccagggccgtggcgatgcgatcctgagctacgccgacctcaccggcggcccgttc
tatcgcactgcgcagagcgcgttcgaccgcaaccggttgatggtgggcatcggtgcggcg
ttgctgaccgaacagggcctgtcgacgcggctggaataccgcggcatcaccgacggcgac
agcaacaacgatcagacctggatgatcaatctggaaaagaaatactga
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