Xiphias gladius (swordfish): 120784559
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Entry
120784559 CDS
T07311
Symbol
si:dkey-24p1.1
Name
(RefSeq) B-cell receptor CD22 isoform X1
KO
K06467
CD22 antigen
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120784559 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xgl04090
]
120784559 (si:dkey-24p1.1)
04091 Lectins [BR:
xgl04091
]
120784559 (si:dkey-24p1.1)
CD molecules [BR:
xgl04090
]
Proteins
120784559 (si:dkey-24p1.1)
Lectins [BR:
xgl04091
]
I-type lectins (Siglecs)
120784559 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
Ig_4
V-set
Ig_5
C2-set_2
Fun_ATP-synt_8
Motif
Other DBs
NCBI-GeneID:
120784559
NCBI-ProteinID:
XP_039974385
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All DBs
Position
LG22:complement(23288017..23307570)
Genome browser
AA seq
1033 aa
AA seq
DB search
MDAQTVGWMVFLVLIKNFSAWNMQVPFELVTTELTSTEGSCIEINCRVIRDLDDEDAYWF
WMKDAKYIDKDYVATIIYSTNISQRPVSPDFVDRVQYIGSSSLSRKIKYASSSGPLCGIL
ICNLTKADNGQYSFRFVGKALWATKKNSTLTVKENPCPLTFMKPPAVNVSDTITLTCSTL
STCLSSPQIEELTQPPLTQHSMSQGKRKTTTVTFTASLEDDGKVFSCTTKDNMDKYLIRN
ISVTVEYAPKDIQTDSSKNVKEGQSVTLTCSAKGSPPPNLSWFKEEELQSSKAEWNIPSI
NDSQSGEYYCKAENRYGKIKSNPVVINVTYVPHVEIEMTLPVSVVKQGDKIILKCDVKRS
NPKPGTYTWLRDENEVGWEQTLVIENIRPEAGGNYKCTATNSVGKGISRPHQIEVQYRPR
QTRISIPGSLGKSVKANSFLTFTCDTDANPTPKTYSWYRYNKNKQTDFPRWSSKTTQENQ
LKLSAQRTDEACYMCNATNDIDTGDDSESLCIKILYPPTKPTLLLVAEVTEGQSITISCT
VESFPPSTLTLTRTPNYNHQPSIFTHHDIYSQGINKLHHTFIVNSTHDGFYTCTANNSEG
SNTSKQRKLVVKYTPINVKVEGPPGLVVNENTLLKLHCNAQSYPSVTSVTWMKVTDGKDK
TIRGSKTLTFIVGSASPSDSGLYSCEAHNEIGSGKSQRVEVKVRYAPKRINILRAPVRQE
HDGRSSVMLSCSSLCYPPVNQYIWYRRINGNDLNVSNLQNYTVFSDKPGVYYCSAGNEID
KRSSDPVHLFNRDFMKILKFSFLCLTILLLIFAIFLVYRYKRKKSIQQGTRNTQPLFGVL
GLWNGTGRGNLGNETALAEPFRSRDDLLQDQWCHPEAQGHQPNPDSTPASNICSVYSTLN
LPPVNQAPTAEKPTRQQDGQTKDDSLNYASLHFWDKPENKQVKAEEVAVYAKVSRPNPPK
KREQERLEDYENVKIAHVLKSPNPLNDDTDTSEEEVELNYTQVSFTAKPGHQTANSDSST
SDEDDIQYSDVKL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcagacggtcgggtggatggtatttctggtcctaataaaaaatttttctgca
tggaatatgcaagttccctttgaactagtgaccacagagctgacatctacagaggggtcc
tgcattgaaatcaattgcagagtcatacgtgatcttgacgacgaggatgcatactggttt
tggatgaaggatgcaaaatatattgacaaagattatgttgccactattatttacagcaca
aatatctcacaacgtcctgtcagtccagactttgtagacagagtgcaatatatcggctct
tcatctttaagtaggaaaataaagtatgcatcctcatctgggccactatgtggtattctc
atctgcaacctgacgaaagctgacaacggacagtattctttcagatttgtaggaaaagca
ttatgggcgactaaaaaaaattcgaccctcacagttaaagaaaatccatgcccactcact
tttatgaaaccacctgctgtgaacgtatctgacacgataacactcacatgctccactttg
agcacatgtctctcaagcccacaaattgaagaattgacacagcctcccttgacacaacac
tcaatgtctcaggggaaacgtaaaaccaccacagtcacatttacagccagcttggaggat
gatgggaaggtgttttcatgcacaacaaaggataacatggacaaatacttgattcggaat
atcagtgtaacggttgaatatgctcctaaagacatacagactgacagctctaaaaatgtc
aaggaaggacagtcagtgactctcacttgctctgccaaaggaagtcctccccccaacctt
tcctggtttaaggaagaagaactgcagtcctcaaaggcagaatggaacatcccatcaatt
aatgattcacagagcggagaatactattgtaaagctgagaacagatatggaaaaattaaa
tcaaatccagtcgttattaatgttacatacgtgcctcatgttgagatcgagatgactcta
cctgtgtcggtagttaaacaaggagataaaattattttaaaatgtgatgtgaagagaagt
aacccaaaacccggcacctacacttggttgagagatgaaaatgaagtcggatgggagcag
acacttgttattgaaaatatcaggcctgaggccggtggcaactacaaatgtacagccact
aacagtgtgggtaaaggaatatcaaggccacatcaaatcgaggttcaatacaggccgagg
cagacacgaatttccatccctggctctcttggcaaaagcgtgaaagctaatagcttcctc
acattcacctgtgacaccgatgccaatccgaccccgaagacttactcctggtaccgttac
aacaaaaataaacagactgacttcccccggtggagttccaaaacaactcaggaaaatcaa
ctaaaattgagtgcacaaagaacagatgaagcatgttacatgtgcaacgccaccaacgac
attgatacaggggatgatagtgagtcgttgtgcataaaaatattgtatcctcccaccaaa
cccacactgttgttggttgctgaggtcacagaaggtcagagtatcaccatctcctgcact
gttgaaagtttccctccatcaactctcaccttaacaaggactcccaactataatcatcag
ccttcaatatttactcaccacgatatttattcgcaaggcatcaacaaactccaccataca
tttattgtaaattcaacccacgatggcttttacacctgcactgcaaacaacagtgaaggt
tcaaatacaagcaagcaaaggaagttggtggtgaaatatactcccataaacgtgaaagta
gaaggtccgcctggtcttgttgtgaatgaaaatacgctgttgaaactgcactgcaatgcc
cagtcgtacccatcagtaacctctgtcacctggatgaaggtgactgatgggaaagataaa
accatccggggctccaagactctgaccttcatcgtagggtctgccagtccctctgacagc
ggactgtacagctgcgaagcccataatgaaattggaagtggaaaatcacagcgagttgag
gttaaagtcagatatgctccaaaacgaataaacatcttgagagcaccagtgaggcaagag
catgatgggaggagctctgtgatgctcagctgcagcagtctctgctatccaccagttaac
cagtatatctggtataggaggataaatggaaatgatttaaatgtgtctaatcttcagaac
tacacagtgttctcagacaaaccaggagtctactactgcagtgcaggaaatgaaatagat
aaaagatcgtctgacccagtccatctgtttaaccgagactttatgaagatcctgaagttc
tcttttctctgtctcactatcctgctccttattttcgcaattttcctagtttacagatac
aagaggaaaaaatcaattcaacaaggaactaggaatacacaacccttatttggtgttttg
ggtttgtggaatggcaccgggagggggaatctgggaaatgagactgccttggcagagcct
ttcaggagcagagatgacctcttgcaagaccagtggtgccatccagaggcccaaggacac
cagccaaatccagacagcacgcctgcatccaacatctgcagtgtttacagcactttgaat
ctgccccccgtaaatcaagctcccactgcagaaaaacccacaagacagcaagatggacaa
acaaaggatgattctctcaactatgcttctctgcacttttgggataagccagagaacaaa
caggtgaaagcagaagaggttgctgtgtacgcgaaggtgtccaggccaaatccacctaaa
aagagagaacaagaaaggctggaggactatgaaaacgtcaaaatagcacatgtactcaaa
tccccgaatccattaaacgatgacacagacaccagtgaagaggaagtggagctcaactac
acacaggtgagcttcacggcgaagccaggacatcagacggccaacagcgactccagcacc
tctgacgaggatgacattcagtactctgacgtcaaactctga
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