Xiphias gladius (swordfish): 120786305
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Entry
120786305 CDS
T07311
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03022
Basal transcription factors
xgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120786305 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
120786305 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120786305 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120786305 (gtf2h4)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120786305 (gtf2h4)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120786305 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
120786305
NCBI-ProteinID:
XP_039977609
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All DBs
Position
LG24:complement(1187866..1235751)
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AA seq
500 aa
AA seq
DB search
MLLLKPSEDLLKVSFFNSQDFHHILAFTAASQQNKNDMKLRVQLQCKNLHEYLRDLSPEI
LDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLPQAAVALWVKKDSQKDHDECVSVL
AGLRLWHSQQLQGGLQGYILNPVFKENLRIALLGGGRAWADEGSTLGPDRHARDIESLDR
YAMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMKSEAGEAPYITSSGFQFLLLDTSSQ
LWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRDYSVEGMSESLLTFLQHLREFGLV
FQRKRKSRRYYPTRLAITLAAGVNTSCSSSSNSASTPGTGDAGFIVVETNYRIYAYTNSE
LQIALVALFSEMLYRFPNVVVAQVTRESVQQAIANGITAQQIIHFLRTRAHPVMLKQTPV
LPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFEVLRDRAQGLGCLVWQDVAHRVMV
VTPQGHSEVKRFWKRQKSHT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcttaagccatctgaagatctcctgaaagtttctttcttcaactcacaagat
ttccatcacattttggcattcacggcagcatcccaacagaacaaaaatgatatgaagctg
cgtgtccagctgcagtgtaagaatttgcatgaatacctgagagacctgagtcctgagatt
ttggacagactgtacaaccatccagcaacatgtctggctgtctacagggaactcccctct
ctggccaagaattatgtaatgcgtatgctgttcctggatcagcccctcccccaggcagca
gtggcattgtgggtgaaaaaagacagtcagaaggatcatgacgaatgtgtctcagtgttg
gcaggactccgcctttggcacagtcagcagctccagggtggtctgcaaggatacatttta
aatccagtgttcaaagagaacctgaggattgctctgcttggcgggggcagagcgtgggcc
gatgagggcagcactctgggtcctgatcgccatgcacgggacattgagagtcttgaccgt
tatgctatggagcgctgggaggtcattctgcatttcatggtgggttctcccagtgctgct
gtcagtcaggacctggctcagctgctggttcaagcaggcctcatgaaaagtgaagcagga
gaggcgccctatatcacctcatctggtttccagttcctcctactggacacatcctctcag
ctgtggtacttcaccctgcagtacctcaaaactgctcagtccagagggatggacctggtg
gagatcttatcattcttattccagctcagtttctctactctgggcagagattactcagtg
gagggaatgagcgagtcattactcaccttcctgcagcacctgcgggagtttggactggtc
ttccagaggaagaggaagtcaaggcggtactaccccaccagactggccattactctggct
gcaggggtcaacaccagctgttcctcctcctccaactcggcttccactcctggtactgga
gatgcaggattcattgtggtggaaaccaattatcgtatctacgcgtacacaaactcggaa
cttcagatcgccttggtggctctcttcagtgaaatgctgtatcgctttcccaatgtagtg
gtggctcaggttacaagggagtcagtgcagcaggccattgccaatggcatcactgcacag
cagattatccactttctcaggaccagagctcaccctgtcatgctcaaacagaccccagtg
ctgcctccaaccataacggatcagatcagactgtgggagctggagagagatcgactacag
ttcacagagggagtgctctataaccagttcctctcccaggctgactttgaggtgctgcga
gacagagctcagggtctgggctgtctggtgtggcaggacgtggctcacagggtaatggtg
gtgacaccgcagggacacagtgaggtcaagcggttctggaaacgacagaagtctcacacc
taa
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