Xiphias gladius (swordfish): 120790147
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Entry
120790147 CDS
T07311
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X1
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120790147 (rbbp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120790147 (rbbp8)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
120790147 (rbbp8)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CtIP_N
SAE2
zf-C2H2_3
HALZ
Herpes_IE2_3
IFP_35_N
MTR4-like_stalk
GOLD_2
Motif
Other DBs
NCBI-GeneID:
120790147
NCBI-ProteinID:
XP_039983408
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Position
LG5:complement(591117..598958)
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AA seq
667 aa
AA seq
DB search
MSSPGPSSGTNGPDQLFEDLWRRLGECHRDALQELEAKVSRLKKERCLDAQRLEVFYNRN
QQLKEQNKSLQDAVGLLEERLRAGECDRCATAEENLKSNRDQNLQLVANLENERNGLKDE
NRKLHAELQRLQVSRSEPRRSSTPQQEEGVIPDSPVLLGSLPAANKLRKRKNVVKSRHVR
YAEVPLPQCDSSLFSGLSKEPADASKNPGRAEVLVPDTCELDTTQIPKDVKQCMEEAIAE
TCVLQRLDQHHAKTEWTAGQQSSSKTPWKKDVRLKPYCSSGWSTLIHSPDLTTERSPSLL
PRVKRFSDDGSVNRAKRKKEEAEPEVQEDAKRGIQEGVDTQKEAKRTQPEPIKRSATPLS
NQSFTKQLLDSKVQSALHGASSPRPSVSGASPAFKKPNGKVKGEGAGVGKKRNPLQDLNA
SPDQHEAEDAERKHKVEPTWSVDPALALSTYDSEWRGDEQEEIHGEPADTDCTWVSHSLL
QCRDRGDSVSGLGQKANDSLDLMFDTTAYGEYKSYNGSQLGQSQPCDDDDDYDDEEEGEK
DSGRDSPDKASAQSKARHPTFAHVAVVRKKDERRKLKGTTCKECEIYYAHLSEEEKQKKL
SACSRHRFLYIPPCTPENFWEVGFPSTQTCIERGYIKEEKNPQVRSRRRQPFNALFSQQQ
ERNQQES
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccgggaccgagcagcgggaccaacggaccggatcagctctttgaagattta
tggcgacggctcggagagtgccaccgggacgcgcttcaagagctggaggcaaaagtgagc
aggctgaaaaaggagcgctgtttagacgcccagaggctcgaggtgttttacaatcgcaac
cagcagctgaaggagcagaacaagagcctgcaggatgccgtcggtctcttggaggaaagg
ctgcgagcaggagagtgtgatcggtgtgccaccgcagaggagaacctgaaaagcaaccgg
gaccagaatctgcagctcgtcgccaacctggagaacgaaagaaatggcctcaaggatgaa
aaccgaaaactacatgctgaactgcagcggttacaggtgtctcgctcagagccccggcgg
tcctcaaccccacaacaggaagaaggcgtcatcccggactcgccggtcctgctgggctcg
ctgcccgcggcgaacaaactgaggaaacgtaaaaatgtggtcaaaagcaggcacgtccgc
tatgcagaagtgcctctaccgcagtgcgacagctcgctcttcagcgggctgagtaaggag
cctgctgatgcctcaaagaatcccgggagagcagaagtgctcgtacccgacacgtgtgaa
ctggacacaacccaaatcccaaaagacgtgaagcagtgtatggaggaggcgatcgcagaa
acctgtgttctccaacgtcttgaccagcatcacgcgaaaactgaatggactgcagggcag
cagagcagctcaaaaactccctggaagaaagatgttcgtttaaagccttactgctcctcc
ggttggtccacgctgatccacagtccagacctgaccacagaaaggtccccgtctcttctg
ccccgggtcaagaggttttcagacgatggctccgttaacagagcaaaacgcaagaaggag
gaagctgagccggaggtgcaagaggacgccaaacgcgggatccaggaaggggtggacaca
cagaaggaagccaaacgcacacaacctgaaccgatcaaacggagcgccacccctttaagc
aatcaaagcttcacgaagcagctactggacagcaaggttcagtcagcactacatggggcc
tccagcccaaggccaagtgtttccggtgctagtcctgccttcaagaagccaaacgggaag
gttaaaggggaaggggccggtgttgggaagaaaaggaaccccctgcaggatctgaacgct
tcacctgaccaacatgaagcagaggatgccgagaggaagcacaaggtggagcccacgtgg
agcgtggaccctgcactcgccctgtccacgtacgacagtgagtggagaggagacgagcaa
gaagagattcacggagaaccggcagataccgactgcacttgggtcagtcacagcttactc
cagtgccgggacagaggggacagtgtgtccgggctcggccagaaggctaatgacagtctg
gatttgatgtttgacaccacagcttacggggagtacaagtcttacaacggttcacaacta
ggccagagccagccctgtgacgacgacgacgactacgatgatgaagaggagggcgaaaag
gacagtggacgagattctcccgacaaggcttcagctcaaagtaaagcacgacacccgaca
tttgcgcacgtggcagtagttcgcaagaaagacgagaggagaaaactgaagggcactacc
tgcaaggaatgtgagatttattacgctcatctctcagaggaggaaaaacagaaaaagttg
tctgcgtgctcgaggcaccgctttctttacattcctccctgtactcctgaaaacttctgg
gaagttggattcccatcaacacaaacatgcatcgaaagaggttatatcaaggaagagaag
aatcctcaggtacgttcacggagaagacaaccgttcaacgctttgttctcccagcagcag
gagagaaaccagcaggagagctga
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