Xiphias gladius (swordfish): 120790426
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Entry
120790426 CDS
T07311
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120790426 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120790426 (usp47)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120790426 (usp47)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120790426 (usp47)
Ubiquitin system [BR:
xgl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120790426 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120790426
NCBI-ProteinID:
XP_039983847
LinkDB
All DBs
Position
LG1:19612064..19633644
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AA seq
1364 aa
AA seq
DB search
MEMVPNEENQFVPKEIQNAAEEPRVLCIIQDTTSAKTVNERLTLNLPASTTLSRLYEDVA
HKAGYVNGTFDLAWGNTPDMAPLEHNTEMSLSDSGFEPGGKRNFLQLTDKDGEQPQIASD
ESGTADSSGLDDSSQERFIGPLPRDSTAGCSGDYSSPSYSYSSILNKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDIQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFVQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERVLKPKSLLTFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLAVEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
TMMESKLEVHKDKTLREATEMAYKLMELEGVVPLDCCRLVKYDEFHEYLERSYEGEEDTL
MGLLLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVMVKVHVVDLKSETIASPISVRAYLN
QTITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSDS
TDHQVAFTDSVLWKLLDRHGNTIRVLVLLPEQSPGTLANRTLCQKLGVDSDVPFDESKGN
RKSVEAILEESTEKLKNLSLQQQQGSSTSDSQKSSDASDFEHIESPTQEADSNSSLCVAA
DNRELENRIRATAGSSGGASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSSDTL
CNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEAQY
LYFRAEPCSQDDSSWDTQKCLVVHVDKRITLAAFKQNLEPYVGVTSTQFKVFRVYANNQE
FESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAKGMT
VRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLE
VLNEPERMKSMSQLAVLTRRWSPAAMKLGPFQEVILESSSVEELKEKLSEMSGIPLENLE
FAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEEPMELSEDE
RSELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctaacgaggagaaccagttcgtacccaaagagatccaaaatgcagct
gaggagcccagagtgctgtgcataatccaggacaccaccagtgcaaagacagtcaatgag
aggctgactctaaacctgcctgcttccaccaccctctccagactttatgaagatgttgcc
cacaaagcaggatatgtaaatggcacatttgaccttgcgtggggaaatacaccggacatg
gcaccactggaacataacactgagatgtccctctcagattctgggtttgagcctggtggt
aagaggaatttcctccagcttacagacaaagatggagagcagccccagattgcatcggat
gagtcaggaacagcagatagcagtggactggatgacagttcccaggagcggtttattggg
cccctaccgagagacagcaccgcaggctgcagtggtgactacagcagtccatcttactcc
tactcgtccatcctcaacaaatctgagacgggttatgtgggcttggttaaccaagctatg
acctgctacctgaacagtctgctacaaacgctgttcatgaccccggagttcagaaatgca
ctctacaactgggagtttgaggagtcagaggaagatcctgtcaccagtatcccctaccag
ctgcaaaggctttttgtcctgctgcagactagtaagaaacgggcgattgagaccactgat
gtgacgagaagctttggctgggacagcagtgaggcttggcagcagcatgacatccaagag
ctgtgcagggtcatgttcgatgccctggagcaaaagtggaagcaaacagagcaggctgac
ctgatcaaccagctgtaccaggggaagctgaaggattatgtccgatgtctggagtgtggc
tatgagagctggaggattgatacttacctggacatccctcttgtgatcagaccctttgga
gccagccaggcctatggcagtgtggaggaggctttgcaggcattcgtccaaccagaaact
ctggatggacccaaccagtacttctgtgaacgttgcaaaaagaaatgtgacgcccggaag
ggtctgagatttctgcactttccctacctgctgacactacagctgaaaaggtttgatttt
gactacaccactatgcatcgaatcaagcttaatgaccgcatgactttccctgaggaactt
gacatgagtccattcattgatgtggaagatgagaagtcgcctcagacagagagctgcact
gacagtggagcggagaatgaaggcagttgccacagcgaccagatgagcaatgatttttcc
actgatgattgtgtggatgagggcatttgcttggacagcaccggcagcacagagagagtg
ttgaagccaaagagtttgctgacatttgagctgttctccgtcatggtccattctgggagc
gctgcaggtggccactactacgcctgcatcaaatccttcagtgatggccagtggtacagt
ttcaacgatcagcatgttagcaagatcacccaggatgatatcaggaagacatatgggggg
tcctcagggagcagaggctattattccagtgcctttgcaagctctacaaatgcatatatg
ctgatttatagattgaaagatccctcaaggaatgcaaagtatttagccgtggaagacttc
ccagagcacataaagagtttggttcagaaggagaaggagtctgaagagcaggaaaagaga
cagagggagattgagcgcaatacctgcaagatcaagcttttctgcatgcatcccgtaaag
acgatgatggagagcaagctggaagtgcacaaggacaaaactctcagagaagctacagag
atggcctacaagctgatggagctggagggagtcgtccctctggactgttgtcgcttggtc
aagtatgacgagttccacgagtacctggagcgctcctatgaaggcgaggaggacacactg
atgggtctcctgctgggaggagttaagtcctcatacatgttcgacttgctgctagagacc
cgccggccagagcaagtgttccagccttacaaacctggagaggtgatggtgaaggttcat
gttgtggatctgaaaagtgagaccattgcctctccaataagtgttcgggcgtatttgaac
cagacgatcactgaattcaaacagcttattgcacaggctacggggttatctgcagaaaca
atgcgtgtggtcctggagcgctgctataatgaccttcggctcctttatgttccaaacaag
acgctgaaagctgagggattcttcaggagtaacaaggtttttgtagagagctctgactcg
actgatcatcaggttgctttcactgactcagtcttgtggaaactgttggatcgtcacggg
aacacgatcagagtcttggtcttactgcctgagcagtctcctggtaccttggccaacaga
actctttgccaaaaattgggagttgactctgatgtgccctttgatgagtcaaagggtaac
aggaaatctgtagaagctatactcgaggagagcacagaaaagttaaagaatctatctctg
cagcagcagcagggctccagcaccagtgacagccagaaaagctctgacgccagcgacttt
gagcatatcgaatccccaacccaagaggctgactcgaactcttcactgtgcgtggccgca
gacaacagagagttagagaaccggatcagggccacagctgggagcagcggcggtgcctcc
tctgaccccgagaaccactttgcctgtgaggagcgctcagactctgaggtgaacaatgac
cgcagcaccagctcagtggacagcgacatcctgagctctagtcacagtagtgacacactg
tgcaatgcagacagcggacccatacagctggccaatggcctggactcgcacagcatcaca
agtagccgacgctccaaagcccacgagggcaaaaaagagacctgggacactgctgaagaa
gactctggaacagatagcgaatatgacgacaatgggaagagcaaggcagaggctcagtac
ctgtacttcagagcagaaccttgttctcaggatgactcctcgtgggatacacaaaaatgt
ttagtagttcatgtggacaagagaataacattagcagcatttaaacagaacctggagccc
tatgtaggagtgacctcgacccagttcaaggtgtttcgggtgtacgccaacaaccaggag
tttgagagcgtacggctcaacgaaacactctcatcgttctctgacgataacaagataacc
attcgactaggaagagcacttaaaaagggtgaatacagagttaaagtgtatcaactacta
gtgaatgaaccagagccctgcaagttccttgtggacacggtgtttgccaagggcatgact
gtcagacaatccaaagaggagctgcttcctcagttgaaagagcagtgcaagcttgacctc
agcattgacagggttcgtctcaggaaaaagacatggaagaacccaggtacagtgtttctg
gattaccatgtctatgaggaggacatcagcatctcctccaactgggaagttttcctggaa
gtcctcaatgaaccagagaggatgaagtccatgtcgcagctggctgtgctgacccggaga
tggagcccggctgcaatgaagctggggccttttcaggaagtgattctggagagcagcagt
gtagaagaacttaaggagaagcttagtgaaatgagtggtattcctcttgaaaacctggag
tttgcaaagggtagaggaacgtttccttgtgatatttctgtgttggagatccatcaggat
ctggactggaaccctaaggtgtcaactcttaatgtgtggcctctgtacatctgtgatgat
ggagctgtggtcttctacagggacagcacagaggagcctatggagctgtcggaggatgag
cgcagtgagctgatgaagaaggagagcagtcgtctgctcaagactggacaccgtgtcagc
tactcgccgcgcaaagagaaagccctcaagatctacctggacggaggccctgccaaggac
ccggggcaggactga
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