Xiphias gladius (swordfish): 120791984
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Entry
120791984 CDS
T07311
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgl03016
]
120791984 (tyw1)
Enzymes [BR:
xgl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
120791984 (tyw1)
Transfer RNA biogenesis [BR:
xgl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120791984 (tyw1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
120791984
NCBI-ProteinID:
XP_039986879
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Position
LG7:24865429..24918762
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AA seq
751 aa
AA seq
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MLNFYLIILLFIIRVSTSDNKASKNERSPGESCFMSIWHNRLYLYSAAALVFGIWFSLKM
ALKKKSFSKDIGPWVYKAVKNNERPGRDPVVHVSGVQIFYGSQTGTAKGFAKELSEEVKA
LGIPAEVTDMKDYDPDDQLADECTSKSVCVFVVATYTDGRPTQNAEWFCKWLEEASTDFR
YGKTYLKGLRYAVFGLGNSVYVGHYNTVGKNVDKWLWMLSGMRIMTRGEGDCNVVKSRNG
SVQADFLAWKVKFMNRLQALAKGEKKSCSGNCKTGGSCKNKRTEGQVEEEEKAAPQNASS
EEDLVESSSDEDESGLQDEKKSGLVVDMEDLGNIMNSARKAKSNEEGRGDGQMVKLSKLN
GVKKIEDEGERREMITPALKEALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYG
IESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILQDAVEKHQNMIRQFR
GVPGVKSERYEEGLAVKHCALSLVGEPIMYPEINTFIRLLHSHHISSFLVTNAQFPQEIR
SLVPVTQLYVSVDASTKDSLKKIDRPLFKDFWPRFLDSLKALGEKRQRTVYRLTLVKAWN
VEEMQAYSELIALGQPDFIEVKGVTYCGESSASSLTMANVPWHQEVVAFVQQLADMLPQY
DIACEHEHSNCLLIAHTKFKVDGEWWTWIDYERFQELVRAHEESGGQRSFSASDYMAKTP
SWALFGAREQGFDPADTRFQRRNKTKDISGC
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatttctatctaataattttgcttttcataatacgtgtgtctacctctgataat
aaagcctctaagaatgaacgcagtcccggcgagagctgtttcatgtcgatatggcacaac
aggctgtacttgtactcagcggctgcacttgtctttgggatctggttctcactgaagatg
gcactgaagaagaaaagtttctccaaggatattggtccttgggtctacaaagctgtgaag
aacaacgagcgccccggcagagaccctgtggttcatgtgtcgggagttcaaatcttctac
ggctcacaaactggaacagcaaagggctttgcaaaagagctgtcagaagaggttaaggct
ctggggataccagctgaggtgactgacatgaaagactacgatccagatgatcaacttgct
gatgagtgcactagtaagtccgtctgcgtgtttgttgtggccacatacaccgatggacgg
cccacacagaacgctgagtggttctgtaagtggctggaagaggcctccactgacttcaga
tacgggaagacctacctcaaaggcctcagatatgcagtgtttggtctcggcaactctgtc
tacgttggccactataacacggtgggcaaaaacgtggacaagtggctttggatgttgagt
ggcatgcgaatcatgacgaggggtgagggtgactgtaatgtggtgaagagccgcaatggc
agcgtccaggcagacttcctggcctggaaggtcaagttcatgaaccggcttcaggcgctg
gccaagggtgagaagaagagctgcagcgggaactgtaaaactggaggctcctgcaagaat
aagaggacagagggacaggtggaggaggaggaaaaggcagctccacagaatgccagctct
gaggaagatctggtagaatccagcagtgatgaggatgagtctggcctgcaagatgagaaa
aaatccggtttagtggtggacatggaggatctgggcaacatcatgaacagcgccagaaaa
gccaagagcaatgaggagggtcgaggagacggccagatggtgaagctatccaagttgaat
ggagtgaagaagattgaggatgaaggggaaagaagagagatgatcacccctgcccttaaa
gaagcactgacaaagcaaggctacaaactaattggaagtcactcaggagtgaagctttgt
cgatggaccaagtctatgttgcgagggagaggaggctgttacaagcacactttctacggt
attgagtcccaccggtgcatggaaactacccccagccttgcctgtgctaacaagtgtgtc
ttctgctggagacatcacaccaaccctgtgggcacagagtggcgctggaagatggaccct
gctgagaaaatcctgcaggacgccgtggagaagcaccagaacatgattcgacagttcaga
ggtgtccctggagtgaagtctgagagatacgaggagggcttggcggtcaagcactgtgcc
ctctccctggtgggtgagccaatcatgtaccctgaaatcaacacctttatccgcctcctc
cactcacaccacatctccagtttcctggtcaccaacgcacagttcccacaggaaatcaga
agcctggtgccagttactcagttgtatgtgagtgtggatgcgagcaccaaagacagtctg
aagaagattgaccggccgcttttcaaggacttctggccacgcttcctggacagcctcaag
gccctgggagagaagagacagaggacggtgtacagactgacgctggtgaaggcctggaac
gtggaggagatgcaggcctactcggagctcattgctttgggccagccggactttattgaa
gtcaagggtgtgacatactgcggggaaagctccgccagcagtctgaccatggctaacgtc
ccctggcaccaggaagtcgtggcctttgtccagcagctggctgacatgttgcctcagtat
gacatcgcctgcgagcatgagcactccaactgtttgctcatcgcacacaccaagttcaag
gtggatggtgagtggtggacgtggattgactacgagcgtttccaggagttggtccgggca
cacgaggagagtggggggcagcggagcttctcagcctcggactacatggccaagactccc
agctgggctctgttcggagcccgcgagcaaggttttgaccctgctgacacacgtttccaa
cgacgcaacaaaaccaaagacatttcaggatgctga
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