KEGG   Xiphias gladius (swordfish): 120794300
Entry
120794300         CDS       T07311                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03420  Nucleotide excision repair
xgl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120794300 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120794300 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120794300 (cul4a)
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120794300 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xgl04147]
    120794300 (cul4a)
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     120794300 (cul4a)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120794300 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120794300 (cul4a)
Exosome [BR:xgl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120794300 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 120794300
NCBI-ProteinID: XP_039991175
LinkDB
Position
LG1:complement(23614962..23625185)
AA seq 757 aa
MAEDTRQDKRASFSAITEHNTNGMARTSAVASGKTGASKKLVIKNFKDRPKLAENYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDSAVQKRTVDGILEQIELERNGETVDRSLLRSLLGMLSDLQVYKDSFEERFLIETNRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRIASYLDQSTQKPLISCVEKQLLGEHMTAI
LQKGLSILLDENRVTELALLYQLFSKVKGGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMV
QDLLDFKDKMDNVAQSCFARNEGFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQSEPSNIELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIRTATGIEEGELRRTLQSLACGKARVLNKTPRGKDVEDGDRFNFNNDFKH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggcagaggacacccgacaggacaagagagccagcttctctgctataacggagcacaac
accaacgggatggccaggacctccgctgtggcctcaggcaaaactggcgcttcaaagaag
ttagtgatcaaaaatttcaaagacaggccaaaactagcagagaactacactgaggacacg
tggctgaagctacgagatgcagtaggtgccattcagaacagcacctctatcaagtacaac
ctggaagagctctatcaggcggtggagaacctgtgttcgtataaagtctcccccacgctg
tacaagcagctacggcaggtctgtgaagatcatgtgcaggcccagatccaccagttcaga
gaagagtctttggacaacctttccttcctgaagcgaatgaatcgctgctggcaggaccac
tgcaggcaaactataatgatccgaagtatattcctcttcctggatcgtacctacgtgctt
cagaactccctactcccctccatctgggacactgggttggaactgtttcgtacccacatt
gtgagtgacagtgcagttcagaagcgcacagtagatggcattttggagcagatagaactg
gagcggaatggtgagacagtggatcgtagtctgctcaggagcctgctgggcatgctgtca
gacctgcaggtttacaaagattcctttgaggagaggtttttgattgagaccaatcgcctg
tacgcagcagagggacagcggctgatgcaggagcgagatgtgcctgagtatctgcaccat
gtggctcgtcggttagaggaggagaacgatcgtatcgcgagctacctcgaccagagcact
cagaaaccacttattagctgcgttgagaaacaactcttaggagaacatatgactgcaata
ctacaaaagggtctgagcatcctgctggatgagaatcgtgtgactgagctggccctcctc
taccagctcttcagcaaggtgaaaggaggacttcccacactgctgcagttctggagggat
tacatcaagtcctttggtggagagattgtatgtactccggagaaagacaaggacatggtg
caagacctattggacttcaaggacaagatggacaatgtggcacagagctgctttgcacgg
aacgagggatttatcaacgccatgaaggaggccttcgagacctttatcaacaagaggccc
aacaaacctgctgaacttatcgctaaatatgtggattctaagttaagagcagggaacaag
gaggccacagaggaggagctggagagaatcctggataagataatgataatcttccgtttc
atacatgggaaagatgtgtttgaagctttttataagaaggacttggccaagcgtctgctg
gtcggcaagagtgcttctgttgatgcggaaaagtccatgctctccaagctcaaacatgaa
tgtggagcagcatttaccagtaagcttgaggggatgttcaaggacatggaactgtccaaa
gacatcatgatccagttcaaacagtatatgcagaaccagagtgagcccagcaacatagaa
cttactgtcaacatcctcactatgggctactggccttcgtacacacccatggaggtccac
ttgcccccagagatggtaaaactccaggaggtgttcaagctgttctacctggggaagcac
agtgggaggaagctgcagtggcagccgacactgggccacgctgtactaaaggcagagttt
aaagagggtaagaaggagctgcaggtctctctgttccagacgctggtgctgctgatgttt
aatgagggagaggaattcagcgtggaggagattcgcactgccactggcatagaggaggga
gagctcaggcgtacactgcagtccctggcctgtggaaaagcacgtgtccttaacaagacc
cctcgagggaaagacgtggaggatggagaccgtttcaatttcaacaatgattttaaacac
aaacttttccgcatcaagatcaaccagatccaaatgaaggaaacggtagaggagcaggta
agcaccacagagcgtgtgtttcaagacaggcagtatcagattgatgcagctgtggtgcgc
atcatgaagatgaggaagaccctcagtcacaacctgctggtatcagagctctacaaccag
ctgaagttccctgtcaagccgggcgacctgaagaagcggatcgagtcgctcatagacaga
gactacatggaacgtgacaaggagactccgaaccagtaccactatgttgcctga

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