Xiphias gladius (swordfish): 120796799
Help
Entry
120796799 CDS
T07311
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120796799
Membrane trafficking [BR:
xgl04131
]
Protein recycling
Others
Others
120796799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
AIF-1
Motif
Other DBs
NCBI-GeneID:
120796799
NCBI-ProteinID:
XP_039995806
LinkDB
All DBs
Position
LG11:11455536..11525298
Genome browser
AA seq
1246 aa
AA seq
DB search
METRLGRCLFIIFSEWIWLLSLTSFLGGTKAEVRCIPSCQLPRITAFPRELSALDLTNFG
EAPVEEFIGFNGGSPGAKATAGEGENPNVAEWTASEESSSKVQPRLRGNKRSCIREDASN
GQQKLSHSKVFSRASAPLPENATENGTGDANNHGFSGEDGAQVDVTVNENTDVASWRRRR
RRAETWSGFRPEGVDEAPFSDQEEFQLASSTFALSGDTAHNQAMVHWSGQNSSVILMLTK
YYDFNSGRVTESSLWRSTDYGTTYEKLNEKVGPKTILSYLYVSPNNKRKIMLLTDPEVES
SLLISLDEGASYQKHSLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQLVHDSV
VPNRFYWSRLGFDKEQGTIHLEISISDGRSQYITCKLQNCSDGNKGKPFPGFIIPDSLVV
QDEYVFIQVPIGGQSVHYVSYKRNAFYPMKLPKYTLPKDLQIISTDDNQVVAAIQDWHQN
DSYNLYMSESRGLFFTLMLENVVSSGGPEGNIMIDLYEVAGIKGVFLSNKVVENQVKTYI
TYNKGRDWHLLQAPTTDLQGNKIYCEQPFCSLHLHLHVSENPYTSGNIVSKDSAPGIIIA
SGVVGPELTSANVSIYITSDAGNTWREVFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLS
FDEGRNWDKYSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKIDFRSIFQQQC
TSEDYVTWQLHSEGEVCIMGMKRMFQKLKANVRCVKARDQYISQMSDSCPCTEADFECDY
GFERQIEGSCTPAFWFVPSAASRDCITGESFLNTTGYRKALSNNCTEGTLLKYSPRRQKC
PSQAPRGLQLFTSEGTLVATLGRNVTFLVFLEEGLGSTTSITVDFGDGTAISYVNISSID
DGVKHIYSKVGIYQVSATATNTLGFERVTLYLHVSCQLEQVQLSAPSVVVKNKAVNLTTV
LRPSSVGTVIYYWWFDNKTDPVVTLEGAMSFTFSTEGSHSVTVQASVGNTVHQDQMTVAV
YDYFRSHVLAFSSNLDELNPGVSEWREDICRVVKSSMVQVTGISEDQLLVTVLPGLPTTA
ELFIVPEKRSRDRDTDEKWAHLDQHSQVLLSALNQDLIQFTLKPGVQVNVYATRLSPAPL
VDSSDSGHSGTAVIMLVSVVLMGLAVFVIYKFKRKIPGINTYTAEQPDKEQEVIPTVTSI
AVPNPEGDKLTSLDHVDVQLDSKSRVKQRNLQSVLSLPPRTQRTKG
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgcctcggtcgctgccttttcatcattttctccgagtggatttggctcctc
agcctaacttccttcctgggcggaacaaaagcggaggtgaggtgcattccctcgtgccag
ctgccgcggatcacggcgtttccccgggaactctcggcgctggatttgactaattttggc
gaggcaccagtcgaagaatttattggatttaacgggggatcgccgggcgccaaagccacc
gccggcgagggcgaaaatcccaacgttgcggaatggaccgcgagcgaagaaagttcgtcc
aaagtgcagccacggttgcggggaaataaaagaagttgcatccgggaggacgcgtcaaac
ggtcaacagaaactttctcactccaaagtgttttctcgcgcgtctgcgcctttgcctgaa
aacgcgaccgaaaacggcaccggcgatgccaataatcacggcttttctggggaagacggg
gcgcaggtggatgtgacggtaaacgagaacacagatgtggccagctggagacgaaggcga
aggcgcgcagagacctggtccggattcagaccggagggcgtggatgaggctccgttctcg
gaccaggaggagtttcagctcgcaagttcgacatttgcactcagcggggacacggctcat
aaccaggcaatggtgcactggtccggacaaaacagtagcgtgatcctcatgttgacaaaa
tactacgatttcaactctggcagagtaacagagagctctttgtggaggtcaactgattat
gggaccacatatgagaaacttaacgagaaagtcgggccaaaaaccatactgagctacttg
tacgtgagtccgaacaacaaaaggaagatcatgttactgactgacccagaggtggagagc
agcctgctcattagccttgatgagggggcgtcctatcagaaacacagcctggccttcgat
atcctcagcctgctttttcaccccgagcaggaggactggatcttggcttacagccatgac
caaaagctctatgtctctgttgagtttgggagaagatggcagcttgtgcacgacagcgtc
gtccccaacagattctactggtccagactgggttttgataaagagcaaggaacgattcac
ctggagatcagcatctctgatggacggtcacagtacataacttgtaaacttcagaactgc
tctgatggaaacaagggcaagcctttccctggatttatcatccctgattctctggtggtt
caggatgaatacgttttcatccaggtgccaataggtggccagtctgtccattatgtgtcc
tataaaagaaacgctttctacccgatgaagcttcctaagtacactttgccaaaggacttg
cagataatcagcacagacgataaccaggtggtggcagcgattcaggactggcaccagaat
gactcctacaacctgtacatgtctgagtccagagggctattcttcaccctgatgctggag
aacgttgtgagcagtggaggacctgagggcaacatcatgatagacctgtatgaggttgcc
gggattaaaggggtgttcctgtcaaataaagttgttgagaaccaagtgaaaacttatatc
acatacaacaaggggagagactggcatcttcttcaagctccaacgaccgatctccaggga
aacaagatctactgtgaacaacctttctgttcgttacatctgcaccttcatgtgtcagag
aatccttacacctcaggaaacattgtcagcaaagactcagctccaggaattataatagca
tcgggtgtggttggacctgagctgaccagtgctaatgtcagtatttacatcacatctgat
gccggaaacacctggagagaggtttttcaggaagagtacagtgtgtttttcctgaatcaa
ggaggatctttagtggccatccgtcacacacctctgccgattagacacatttggctgagt
tttgatgagggcagaaactgggacaaatatagcttcacctcctctccgctctatgttgat
ggggtgctgggggagcctggagaggacaccctcataatgacaatatttggtcatttcagt
catcgatccgagtggcaacttgtcaaaattgacttccggtctattttccaacaacaatgc
acatctgaagattatgtcacatggcagttacacagtgagggggaagtgtgcatcatggga
atgaagagaatgttccaaaaactgaaagcaaatgttcgatgtgtcaaggccagagatcag
tatatttcccagatgtcagactcttgtccgtgcacagaagcagattttgagtgcgactat
gggtttgagaggcagattgaggggagctgcactccggctttctggttcgttccttcagca
gcatcgagagactgcatcacgggggagagcttcctcaacaccacaggttatcgcaaggct
ttgtctaacaactgcacggaaggaactctgctgaagtacagccccaggcgtcaaaagtgc
ccgagtcaggcccctaggggcctccagctgttcaccagtgagggcacactggtagcaaca
ctggggaggaatgtcaccttcttagtctttctggaagagggtcttggctccaccacaagt
ataacagtggacttcggcgacgggactgccatatcgtatgtcaacataagctccatcgat
gacggggtcaagcatatctacagtaaagttggcatctaccaggtttctgccacagcaact
aacactctgggctttgaaagggtgacactctacctacacgtctcctgtcagcttgaacag
gtccagctgtcggctccttcagtggttgtgaagaacaaagcagtaaacctcaccacagtt
ttacgccccagcagtgtgggaacggtcatttattactggtggtttgataacaaaacagac
cccgtcgtgaccctggagggagcgatgtccttcactttctccacggagggaagtcacagt
gtcactgttcaggcttcggttggcaatactgtccatcaggaccaaatgactgtggcagtt
tacgattatttccggtcacatgttttggccttttcttctaatttggacgagctgaacccg
ggggtgtctgagtggagagaggacatctgcagagtggtgaagagctccatggttcaggtc
acaggaatcagtgaggatcagctcctggtcacagtgcttccaggtttaccaaccacagca
gagcttttcattgtgcctgagaagaggtcaagagacagagacacggatgaaaagtgggcg
cacctcgatcagcattctcaggttctgttaagtgctctgaaccaagacctcatccagttc
acactcaaaccgggggtgcaggtgaacgtatatgccacacggctgtctccggctcctctt
gtggacagcagtgacagtggccacagtggcactgcagtcatcatgctcgtttcagtcgta
ctgatgggcttggctgtctttgtaatatataaatttaaaaggaagatcccgggcatcaac
acatacacagcagagcaacctgacaaagaacaagaggtcattccgacagtgacctccata
gccgtcccaaaccctgagggggacaagctgacctcactggatcatgtggatgtacagctg
gactcaaaaagtagagtaaagcagaggaacctgcagtctgttctgagtttgcccccaagg
actcagcggacaaaaggctga
DBGET
integrated database retrieval system
