Xiphias gladius (swordfish): 120798814
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Entry
120798814 CDS
T07311
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120798814
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120798814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-RING_10
Gp58
DUF4455
Motif
Other DBs
NCBI-GeneID:
120798814
NCBI-ProteinID:
XP_039999411
LinkDB
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Position
LG14:26461047..26462940
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AA seq
559 aa
AA seq
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MAQKGVQLDLETFSCAICLDLLKDPVAVPCGHSYCMNCIKSFWDEEDEKKIHSCPQCRQT
LTPRPVLVKNTMLAALVEELKKTGLQAAPADPGYAGPEDVACDVCTVRKLKAVKSCLICL
VSYCDKHLQPHYESPAFENHKLVDPSKKLQENICSRHDELMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELELSRQQIQQRIQDRERDVKVLQQEAEAINRSADKAVEDSE
KIFTELIRLIEKRSSGVKQQIRSQQKTEVSQVKELQEKLEQEINELKRKDAELKQLSHTE
DHNQFLRNYPSLSGFSQSTDSSSINIRPLRYFEDVTAAVSGVRDKLQDILTEKWMKISLT
EAEMDVPPSHPQPEPKTRAGFLKYSQEITLDPNTAHTRLLLSEGNRKATLMSQRQSCPSH
PDRFIRWRQVLSKESLIGRCYWEVEWRRRVFVAVAYKNISGAERLDECVFGLNNKSWALN
CDQMGYTFWYNSIKTPVSGPQSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLY
AGLWLYWQVGANAEFCKFQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggacctggaaaccttttcctgtgcgatctgtctggat
ctactgaaggatccggtggctgttccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggatgagaagaaaatccacagctgccctcagtgtaggcagacc
ttgacaccgaggcctgtcctggtgaaaaacaccatgttagcagctttggtggaggagctg
aagaaaactggactccaagctgctcctgctgatcccggctatgctggacctgaagatgtg
gcctgtgatgtctgcactgtgagaaaactgaaagctgtcaagtcctgtttgatttgtctt
gtctcttactgtgacaagcacctccaacctcattatgagtctccagcctttgaaaatcac
aagctggtggacccctccaagaagctccaggagaacatctgctctcgtcatgatgaattg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgctgcagaaaggactgagaggcagagagagctg
gagctgagtcgacaacaaatccagcagagaatccaggacagagagagagatgtgaaggtg
cttcaacaggaggcggaggccatcaatcgctctgctgataaagcagtggaggatagtgag
aagatcttcactgagctgatccgtctcatcgagaaaagaagctctggtgtgaagcagcag
atcagatcccagcagaaaactgaagtgagtcaagtcaaagagcttcaggagaagctggag
caggagatcaatgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacaaccagtttctacgcaactacccctcattgtcaggattcagtcaatctacagac
tcatccagcatcaatatccgtcctctgaggtactttgaagatgtgacagcagctgtgtca
ggggtcagagataaactacaggacattctcactgagaaatggatgaagatctcattgaca
gaggctgagatggatgttcctccatcacatccacaaccggagcccaagaccagagctgga
ttcttaaaatattcacaggaaatcacactggatccaaacacagcacacacacgtctgtta
ttatctgagggaaacagaaaagcaacattaatgagtcagcgacagtcttgtcctagtcac
ccagacagattcattagatggcgtcaggtcctgagtaaagagagtctgattggacgttgt
tactgggaggtggagtggagaagaagagtttttgtagcagtcgcatacaagaatatcagt
ggagcagaaagattggatgaatgtgtattcggactaaataacaaatcttgggcattaaat
tgtgaccaaatgggttatacgttctggtataacagcatcaagactccagtctcaggtcct
cagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagt
gtctctgaaaccatgactctactccacagagtccagaccacattcactcagcctctctat
gctggactttggctttactggcaagttggagccaatgctgagttctgtaaattccagtag
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