Xiphias gladius (swordfish): 120799325
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Entry
120799325 CDS
T07311
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120799325
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120799325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-ANAPC11
zf-RING_5
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
120799325
NCBI-ProteinID:
XP_040000355
LinkDB
All DBs
Position
LG14:complement(26003296..26004969)
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AA seq
557 aa
AA seq
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MAQGIRLDRANFCCSICLDLLNDPVTIPCGHSYCMSCIKDHLETEDHRGIHSCPQCRQTF
TLRPVLVKNTMLADLVEELKKTGHQAAPADHCYAGPEDVTCDVCTERKLRAFKSCLQCVA
SYCEKHLQPHYDVGPLKKHKLVEASAKLQENICSRHQEVMKLFCRTDQQCICYLCSKDDH
KGHNKVSTAAERTERQRELELSRQQIQQRLQDREKEVKVLQQDEDAINHSTDNAVRTTDK
IFTELIHTIEKRVSDVKELIKSRQKTEVGQYKKVREKVKQEIAELKRKDADLEKLSRSED
HTHFLLNYPSLSHLGESTDPPCVKVCGLRYFEKVTVALSEARDKIQEVLGEEYAKISVSV
SEVGFLPSNPQAEPKTRNDFFHYACQITLDPDTANKHLSISKGNRKAAFMTEEQKYSIHP
ERFVYSWQVLSKEGLTGRCYWEVEKSGKGVFIAVVYKDISRAGDFGECVFGYNDKSWALD
CYKNSYEFRHNNVKTSIPGTWSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLY
AGLWLANGATAEICKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagggattcgacttgatcgagcaaatttctgttgctcgatctgtctagatcta
ctcaatgatccggtgactattccttgtggtcacagctactgcatgagctgcattaaggac
cacttagaaacagaggatcatagggggatccacagctgccctcagtgtaggcagaccttc
acactgaggcctgtcctggtgaaaaacaccatgttagcagatttagtggaggagctgaag
aaaactggacaccaagccgctcctgctgatcactgctatgctggacctgaagatgtgacc
tgtgatgtctgcactgagagaaaactgagagccttcaaatcctgtctgcaatgtgtggct
tcttattgtgagaaacacctccagcctcactatgatgtaggtcccctaaagaaacacaag
ctggtggaagcatctgccaagctccaggagaacatctgctctcgtcatcaagaggtgatg
aagttgttctgccgtactgatcagcagtgtatctgttatctctgctccaaggatgaccat
aaaggccataacaaagtctcaactgctgcagagaggactgagaggcagagagagctggag
ctgagtcgacaacaaatccagcagagactccaggacagagagaaagaggtgaaggtgcta
caacaggacgaagatgctattaatcactctacagacaatgcagtgaggaccaccgataag
atcttcaccgaactgattcataccattgaaaaaagggtgtctgacgtgaaggagctaatt
aaatctcggcagaagaccgaagttggtcagtacaaaaaggttcgggagaaggtgaagcag
gagattgctgagctgaagaggaaagatgccgacctggagaagctctcacgctcagaggat
cacactcattttctattaaactatccctcattgtcacatctgggtgaatctacagacccg
ccatgtgtcaaagtctgcggtctgcggtactttgagaaggttacagtggctctgtcagag
gccagagataaaatacaggaggttcttggtgaagaatatgcaaagatttcagtgtcagta
agtgaagtgggttttttaccatcaaatccacaagcagaacccaagaccagaaatgacttc
ttccattatgcatgccaaatcacactggatccagacactgcgaacaaacatctctcaata
tctaaggggaacagaaaagcagcattcatgacagaagaacagaaatattctattcatcca
gaaaggtttgtatattcctggcaggtcctgagtaaagagggtctgactggacgttgctac
tgggaggtggagaagagcgggaaaggagttttcatagcagtcgtatacaaggatattagc
agagctggggactttggtgaatgtgtctttggttacaatgacaagtcttgggcattggat
tgttacaaaaatagctacgaattcaggcataacaacgtaaaaacttccatcccaggcacg
tggtcctccagagtaggagtgtacctggaccacagtgcaggtattctgtccttctacagc
gtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggactttggcttgcaaatggagccaccgctgagatttgcaagctcaaatag
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