Xiphias gladius (swordfish): 120799961
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Entry
120799961 CDS
T07311
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120799961 (rbfox2)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120799961 (rbfox2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
120799961
NCBI-ProteinID:
XP_040001527
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All DBs
Position
LG15:complement(18432877..18467955)
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AA seq
457 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMDRDRELDTMAGVHPNPGVAPAAVRGMKRGDPEPDVQTAAAL
VDSAGAECKRPRIDGSGGIGEVGQNNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAANSAANTANSLSAQQSDGSSQIDG
QSGVGSGGGGGGVSAGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFESSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
AALPYAGWKLSPMVGAMYSPELYTVPGFPYQAAAAAAASTAATFRGTHLRGRARPVYSAV
RAAVPQPAIPTYPGVMAYQDGFYSAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSY
GRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatcaatcatgctgcctgtgtcccggggtctcatggac
cgggatagagagctggacaccatggccggggttcatcccaacccgggcgtcgctccggca
gccgtccggggcatgaagcgcggcgacccggagccggacgtgcagacggcggcggctctg
gtggactcggccggggcggagtgcaagcgcccccggatcgacggctcaggaggaatcggc
gaggtcggtcagaataacgaccctttgacccttggttaccatggctacccatctcatagt
cagggctctcaggatagtgctggcggtcaggagggactcgtacccccacctttctccgca
ttccctccacctccaccgccacccccccagaacggcctggccctggattacgggggcagc
ctttatgcagcaggggctgttcagggcccagtggaagccggcggagcagcgaacagtgcc
gccaacaccgccaacagcctcagtgcccaacagtcggatgggtcctcccagattgatgga
cagtcaggggttggctcaggaggaggaggtggtggggtgagcgctggggatgattcagac
gccaaggggacccccaaacgcctccacgtgtccaacatccccttccgcttccgagaccct
gacctacggcagatgtttgggcaatttggcaaaatcctcgatgtcgagatcattttcaat
gagaggggatccaagggcttcggttttgtaacattcgagtcaagtgcagatgccgagagg
gccagagagaagcttcacggtacgctggtggaaggacgtaaaattgaggtcaataatgcc
acagccagagtgatgacgaacaagaagatgaccacaccgtactctaacggagaaggcctc
gctgctcttccatatgctgggtggaagttgagccccatggttggagcgatgtacagtccc
gagctctatacagtaccagggttcccataccaagcagcggcagcagcagctgcttccact
gctgcgacctttcgaggcactcatctccggggtcgtgcccggcccgtctacagtgcggtc
agggcagctgtgccacaacctgccatccctacataccccggcgtgatggcctatcaggat
ggtttttacagtgcggccgatctctatgggggctatgcagcgtatcgttacgcccagccg
gctgcggtagcgactccggcagcagcagcggctgcagcggcagcttacagtgacagctac
ggacgagtttacacggcagacccgtaccatgctgcactcgccccggctgcctatggtgtt
ggagccatggccacgctgtacaggggaggctacagtagatttgccccttactaa
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