Xiphias gladius (swordfish): 120803560
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Entry
120803560 CDS
T07311
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120803560 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120803560 (dcp1a)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120803560 (dcp1a)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120803560 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
120803560 (dcp1a)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120803560 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
120803560
NCBI-ProteinID:
XP_040008071
LinkDB
All DBs
Position
LG18:10344709..10353238
Genome browser
AA seq
467 aa
AA seq
DB search
MATVNAGHMMSLAALQRQDPYIHKLLDVTGQVALYNFNSKANEWEKTEIEGTLFVYARSA
SPHHGFTIMNRLSTENLVEPINKDLEFQLQDPFLLYRNGNLGIYSIWFYDKRDCQRIAQL
MVKIVKQEADHAQRESPERGEPGRTNGVADPRPIDILELLSKAKEEYQRQSSHTMVKQIT
VEELFGSSLPKDPSLPAMPTQNTNTAPSDPSTAYIQNQSFPTPAHQNPGSNQRHQAPPSL
LPAPYALHPSPVFQSVVPRSDPQPRCSVSPLMVPPALSEPRAAPPGPAAPPAVSAAYLGQ
EILSSLKPAVQSVNSDIHKPILAPNFLPSTLVPPHSFQEPMGKPLLQHSKEMDVFSQPPN
LIKAVSAVPMSPGRAVPGPEISVLLSPSAFQQSINKTTTAAASVVLPAPSEPSSTSVAAA
EPPPPPCSKAQLQETLIHLIKNDPDFLSAIHDAYLQTLSKDFSNMKL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtaaatgctggacatatgatgagcttagcagctctacagagacaagacccg
tacatacacaaactgctcgacgttactggccaggtggctctatacaacttcaactccaaa
gcgaacgaatgggagaagaccgaaattgagggcactctgtttgtctatgccaggtctgcc
tcccctcaccatggcttcaccatcatgaaccgactgagcacagagaacctggtggagccg
atcaacaaagacctggagtttcagctgcaggatcccttcctgctctacaggaacggcaac
ttgggtatctacagtatttggttctatgacaagagggactgtcaacgtattgctcagctg
atggtcaagattgtaaaacaagaagcagaccatgcccagagagagtcaccagagagggga
gagcccgggaggaccaatggcgttgcagatccacggcccattgacatcctggaactactc
agcaaagccaaggaagaataccagagacagagctctcacacaatggtgaagcagatcaca
gttgaggagctctttggctcgtccctccctaaggacccctctctacctgccatgcccaca
cagaacaccaacacggctcccagtgatccttccactgcctacatccagaaccagtctttt
cccactccagcccatcaaaaccctgggtccaaccagcggcaccaagccccacctagtctg
ctcccagctccttatgcactacatcccagccctgttttccagtcagtagtccccagatca
gacccccagcctcggtgctcagtttcacctctcatggtgcctccagctctctcagagcct
cgtgctgctccccctggtcctgcagcaccaccagcagtttctgccgcgtatttgggacag
gaaatactcagctcgctcaagccagcagtgcaatctgtgaattcagacatccacaaaccc
atccttgcacccaacttcctgccaagcaccctggtcccaccccacagcttccaggaaccc
atggggaaaccccttctccagcacagcaaagagatggatgttttctctcagcctccaaac
ctgattaaagcagtgtctgctgtccccatgagtccaggtcgtgctgttccaggacccgag
atttcggtgcttctctcccccagcgccttccagcagtccatcaataagacgacaacagca
gcagcatcagtggtccttcctgctccctctgagccctcctctacctctgtagcagctgca
gagcctccaccacccccctgcagcaaagcacagctacaggagactctgatacacctcatt
aagaacgacccagacttcctcagtgccattcatgatgcttacctgcagactctgtccaag
gacttcagcaacatgaagctatag
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