KEGG   Xiphias gladius (swordfish): 120804877
Entry
120804877         CDS       T07311                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120804877 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xgl03041]
    120804877 (sf3a1)
Spliceosome [BR:xgl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120804877 (sf3a1)
 Complex B
    120804877 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    120804877 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 120804877
NCBI-ProteinID: XP_040010523
LinkDB
Position
LG19:complement(21171830..21177251)
AA seq 786 aa
MPPGPVQIIQPESNNKNDVAAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQAAMQQSQQLP
QKVQSQGIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKE
QRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKREAENPREVMDQVKYRVEW
AKFQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARIL
IQERYEKYGESEEVEMEVESEDEEDEREDRDDGQPSQPDQDTQVQDMDEGSDDEDDGMKA
PLPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPSVAAPDEYLISPITGEKIPASKMQEH
MRIGLLDPRWLEQRDRINKERQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKI
GEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPS
KPSEILHQPPIPSSAASLPKPSPPVTAVPRPPSSVPPPVRTTLLSAVPVIPRPPVAPVVR
LAPGQVITPMPPMIPAPRINVVPMPPSAPHIMAPRPPPMVVPAAFVPAPPVPQPPSSAPA
PPSHPPPPHDDEPVSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVL
NFTVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMSNGSIIHLALKE
RGGRKK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgttcaaataattcagccggagtccaacaataagaacgatgtagca
gcagaagaaaccccagccactaaacccatcgttggtatcatatatccacctcctgaggtt
cgaaacatagttgacaagacagccagctttgttgccaggaatgggcctgagtttgaagca
cgaatccgtcaaaatgagatcaacaatccgaaatttaatttcctcaaccccaatgacccc
taccatgcctactaccgtcacaaggtcaatgaatttaaggagggcaaagcgcaggaacca
tctgcagcagtgcctaaggttatgcagcaggcggccatgcagcagtcccagcagcttcct
caaaaggtgcagtcacaggggattcaggagacagtggtccccaaagaaccacctcctgag
tttgagttcattgcggatcctccgtcaatctcagcatttgacctggatgttgtcaagctc
accgcccagtttgttgctcgcaatggccgccagtttctcactcagctcatgcagaaagaa
cagagaaactaccagtttgactttctgcggccgcaacacagccttttcaactacttcacc
aaactggttgagcagtacactaagattctgatccctcccaaaggcctactgaccaagctg
aagagagaggctgagaatccaagagaggttatggaccaggtaaagtaccgggttgagtgg
gcaaagttccaggagcgcgagagaaagaaggaggaggaggaaagagagaaagaacgggtg
gcttatgcccaaatcgactggcatgactttgtagtggttgaaacagtggatttccagccc
aacgaacaaggccacttccccccacccaccacaccagaggagcttggcgctcgcatccta
atccaagagcgctacgagaagtatggagagagtgaggaggtggagatggaggtagagagt
gaggatgaagaggatgaaagggaggatcgggacgatggccagccctcacaacctgatcaa
gacacacaagtgcaggacatggatgagggatctgatgacgaggatgatggcatgaaggct
ccactgccaccagacaaccctatgccacccccactgcccccaactccagaccaggttatt
attcgcaaagactacgaccccaaagcatccaagcctcagccatcagtggcagctccagat
gagtacctcatctccccaattactggtgagaagatcccagccagtaagatgcaagagcac
atgcgtatcggtctgctggatccacgctggctggagcaaagagatcgcataaacaaagag
agacagacagaggatgaagtctatgctcctggattagatattgagagcagcttgaaacag
ctggctgagaggcgtaccgatatcttcggtgtggaagagacggccatcggtaagaagatt
ggcgaagaagaaatccagaaaccagaggagaaggttacctgggatggccattcaggaagc
atggctcgtacacagcaggcagcacaggccaacatcaccctgcaagagcagatcgaagca
attcacaaggcgaaaggactcgtgggagaggatgatactaaggagaaaattggcccaagc
aagccaagtgaaattcttcaccagcctcccatcccctcctctgcagccagtttgcctaaa
cccagtcctcctgtcactgcagtgcctcgcccaccctcctctgtgccacctccagtgcgc
accactctcctgtctgctgtacctgtaattccaagaccacctgtggctccagtggtgcgc
cttgcaccaggacaagttatcacaccaatgcctcccatgattcctgctccccgtatcaat
gtggtcccaatgccgccatcagcaccccacatcatggccccaagaccaccccccatggtt
gttccagctgcatttgtcccagctcctccagtaccacaaccaccaagctctgctcctgca
ccaccttcccacccacccccacctcatgacgatgagccagtcagcaagaagatgaagaca
gaggacaaccttattccagaagaggagttccttcgtagaaataagggtcctgtggcagtt
aaagtacaggtccccaacatgcaggacaagactgaatggaagctaaatggccaagtgctg
aatttcactgtcccgctcacagatcaggtgtctgttattaaagtcaaaatccatgaagca
acgggcatgccagcaggaaaacagaagttacaatatgagggcattttcatcaaggattcc
aactccctggcttattacaacatgagcaacggttcaatcattcacttggcactgaaggag
agaggtggaagaaagaagtga

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