Xiphias gladius (swordfish): 120805533
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Entry
120805533 CDS
T07311
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03022
Basal transcription factors
xgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120805533 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
120805533 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120805533 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120805533 (gtf2h2)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120805533 (gtf2h2)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120805533 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
120805533
NCBI-ProteinID:
XP_040011771
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All DBs
Position
LG19:27506053..27515016
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHEQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLMEAFVDEYFDQNPISQVGIITTKNKRAEKLTDL
TGNPKKHITALKKAVDTVCVGEPSLYNSLNLAIQSLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLISLKVRVSVIGLSAEVRVCTVLTKETGGMYHVILDESHFKELLMMHVKPPP
ASSSSECSLIRMGFPQHTIAALTDQDAKPSFSMSHLDSSSGPGLSLGGYFCPQCHAKYTD
LPVECKVCGLILVSAPHLARSFHHLFPLEAFVESPVEDLQGDRFCQACQGELKDKSIFTC
TSCHSVFCSECDLFIHDSLHCCPCCIHSQIAP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaccagagagagccaaacgctgggaaggaggctatgagaggacatgggag
gtgctgaaggaggacgaatctggctcactcaaagccacagtggaagagatcctgttccag
tccaaaaggaaaagggtgatagagagccatgaacaagtgaggcttgggatgatgcgtcac
ctctatgtggtgattgactgttcaagaagtatggaagaccaggacttgaaaccaaaccgc
ctcacctctactctaaagctgatggaagcttttgtcgacgagtatttcgaccaaaacccc
atcagtcaggtgggcattatcaccacaaagaataaaagggctgagaagttgactgacctg
acaggaaatccaaagaaacacattactgctctgaagaaagcagtggacactgtgtgtgta
ggagagccttctctgtacaactctctaaacctggccatacagtccctcaagcacatgcct
ggacatacgagccgggagatcctgataatcctcagtagcctcaccacatgtgacccggcc
aacatatatgagctgatcaagaccctgatttctctgaaggtgcgggtgtcagtaatcggc
ctgtcagcagaggtccgggtgtgtacggttttaaccaaggagacgggtggcatgtaccac
gttatcctggatgaaagtcacttcaaagagcttctgatgatgcatgtcaaaccccctcca
gccagctcctcatctgaatgctctttaatacgcatgggttttcctcagcacactatcgct
gctctgactgaccaggatgccaagccttcattcagcatgtctcatctggacagcagcagt
ggtccaggtctgtctctgggaggatacttctgtccgcagtgccacgccaagtacacagac
cttcctgtggagtgtaaagtctgtggtttgattttggtgtcagccccccatctcgccaga
tccttccaccatctcttccctctcgaggcctttgtagagagccctgtggaggatctccaa
ggagacaggttctgtcaagcttgtcaaggggagctaaaggataaaagtatattcacctgt
acatcatgtcacagtgtgttctgttcggagtgtgatctcttcatccatgattcgctccac
tgctgcccctgctgtattcacagtcagatcgccccctga
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