Xiphias gladius (swordfish): 120806821
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Entry
120806821 CDS
T07311
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120806821 (ythdc1)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120806821 (ythdc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
120806821
NCBI-ProteinID:
XP_040014217
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Position
LG20:complement(25508033..25526995)
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AA seq
687 aa
AA seq
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MAADRREDKDGELNVLEDILTEAPDQDDELYNPETERDVSDKKGTKRKSERTDSHDLKRL
RPSSGHVPSRSSSTNKRAPGPPLSSSSSKMTTSSPRGRHTAAGGYRNEYYEERKGRRGAR
EATRSRGGEDARRRDSQRGLKGLSQKLRRDERRASPSPHEEDNQSEDEAAAEYGSEQGSG
SASPTASHVEEEEEEDQEEDEEEEEEEEEEGMEEEEEEEEEEEGEKEEEEEEEEYERRGG
EGNDYDTRSEAGDSRSASSVSFSDDGESAHSGSASEASGSEKKQEKLSSSVRAVRKGMEN
PTSKLRYILRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVVLVFSV
RESGKFQGFARLASESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFTKTAHLSN
PWNEHKPVKIGRDGQEIQPDIGAQLCALFPLDESVDVHQVARRVRHKRRTPSEPRPRGRP
PQREPGRRRPEEYDLHGRKRPRADGPPDFNQRAGFIQDLRNQPVDRRFSSVRRDVFLNGS
YNDYMRDYHHSVGPPAPWQTLAAYPGVEQPPPHHPPYYHHSHPPPPPHQAYHHHHHPPLP
PHEAPPPRFRDKQRAPQHRAFASSPHDYDMRVDDFLRRTQAVVSSRRERERQRERERGGP
RRERERERARDRDRERERDKERGRYRR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaggacaaagatggagaattgaacgttctggaagatattctg
actgaggctccagatcaggatgatgagctgtacaaccctgagaccgaacgagacgtcagc
gacaagaagggaacaaagagaaagagtgagcgcactgacagccatgatctgaagaggctc
cgcccgtcatcaggccatgtcccctccaggtcgtcctccactaataagagagcccctggc
ccgccactctcctcctcctcctccaagatgacaacgtccagcccccgtggccgacacacc
gctgctggcggctaccggaacgaatactacgaggagcgaaagggacggcgcggggcccga
gaggcaaccagaagccgtggaggagaggatgcacgacgccgagactcccagagaggcctg
aagggtctgagccagaaattgcgacgtgacgagcggcgagcgagcccttccccccatgag
gaggacaaccaatcagaggatgaggcagcagcagagtacggctcagagcagggatcagga
agcgcttcccccacggcctcacatgtagaggaggaggaagaggaggatcaggaggaggac
gaggaggaggaggaggaggaagaagaagagggaatggaggaagaggaggaggaagaagag
gaggaggaaggagagaaggaggaagaggaagaagaggaggagtacgagcgacgtggtggc
gagggtaacgactacgacactcgtagcgaggctggcgactcacgctccgcctcctccgtc
agtttctctgacgacggcgagtcggctcactcaggctccgcctcagaggcttcaggttcg
gagaagaagcaggagaagttgtcgtcgtcggtccgagctgttcgcaaagggatggagaat
ccgaccagtaagctgcgctacatcctgcgagacgctcgattctttctcataaagagcaac
aaccatgaaaacgtctccctggctaaagcaaagggtgtgtggtcaacgctgcctgtgaat
gagaagaagctgaatgcagctttccgctcggctcggagtgtcgtcctcgtcttctctgtg
agggagagcgggaaattccaaggttttgctcgtttggcgtcagagtctcatcatggtgga
tctccgatccactgggttcttcctgctggcatgaatgcgaaaatgctgggtggagtcttt
aaaatcgactggctctgcaggagggagcttcctttcactaaaacagctcacctgtccaac
ccttggaatgaacacaagcccgtcaagatcggacgcgacggacaggagatccaaccagac
ataggagctcagctctgtgccctgttcccgttggatgagagtgtggacgtccaccaggta
gctcgccgtgttcgtcacaaacgtcggacgccgtcggagccgcggcctcgaggccgacca
ccacagcgcgaaccgggaaggcgtcgacctgaagagtacgacctccatggcaggaagcgg
ccacgagccgacggtccacctgacttcaaccagcgagcagggttcatccaggaccttcgt
aaccagccggtggacagacgtttctccagcgtgagacgagatgtttttctcaatgggtcc
tataacgactacatgagggattaccaccacagtgtcggccctcctgctccctggcagact
ctggcggcgtaccccggtgtggagcagccgcccccacatcaccccccctactaccaccac
agccacccccctccgccccctcaccaggcttaccaccaccaccaccacccccccctgccg
ccacatgaggctccacctccccgcttcagagacaagcagagagcgccgcaacaccgcgcc
tttgcctccagcccgcatgactacgacatgcgtgtggacgacttcctgcggcggacacag
gcggtggtgagcagccggcgggagcgggagcggcagcgtgagcgggagcgtggcggaccc
cgccgtgagagggagagagagagagccagggacagagacagagagagagagagggacaaa
gagagggggcggtaccgtaggtga
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