Xiphias gladius (swordfish): 120807078
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Entry
120807078 CDS
T07311
Symbol
lmx1al
Name
(RefSeq) LIM homeobox transcription factor 1-alpha isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120807078 (lmx1al)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
120807078 (lmx1al)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120807078
NCBI-ProteinID:
XP_040014671
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Position
LG3:16778640..16797442
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AA seq
435 aa
AA seq
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MCVHSPYFVLLMTLLRRFSCSGSADILGGGKHDAFLSFCSDHTEGRREGMKTEETQQSCL
QQPPSSTPFGPEYRGGGEVCAGCESPIADRFLLRVNERSWHETCVKCAVCLSVLTGTCYC
RDRLLYCKHDYEKLFVRKCSACLQVIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEF
VLKEGQLLCRMDYEKEREMLAAISPTPTESVKSEDEDGGGGSGGGKGGDEGKEHKRSKRP
RTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQ
QQQQQQQEQEQLGGTRRGQSRGGRQSNDDSEDGSSTHGMDGMLGYPSLPRQQLLALDPNI
YGGEPFRHGLTPPQLNNEQLHSYDSETVFHDLDSDGSLGHLGDCLLATGDGGLLPGRVGN
PIDRLYSMQNSYFTS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgcacagtccatattttgtcttactaatgaccttattacgaaggttttcctgc
agtggttccgctgatatcttaggggggggaaaacatgatgcatttctgtctttctgtagc
gatcacactgagggaaggagagaagggatgaaaacagaggagacccagcagtcctgtctg
cagcagcctccatcctcaacgccttttggtccggagtacaggggaggcggagaggtgtgt
gcgggctgcgagtcccccatcgccgaccgcttcctgctccgcgtgaacgagcgctcctgg
cacgagacctgcgttaagtgcgccgtgtgtttgagcgtgctcaccgggacctgttactgc
agggaccgcctgctgtactgcaagcacgactatgaaaagctgtttgtaaggaagtgcagc
gcctgcctgcaggtgattggacgttcagagttgataatgcgtgtgctaggccaggtgtac
cacctgggctgctttagctgctgcgagtgtgaacgccggctgcagagaggtgatgagttt
gtgctgaaagaaggccagctgctctgccgcatggactacgagaaggagagggaaatgctg
gctgctatcagtcctacaccaacagaatcagtgaaaagtgaggatgaggacggtggaggg
ggctccggtggtgggaagggtggtgatgaaggcaaggagcacaagcgttcaaaacggcca
cgcaccatcttgaccacacagcagcgccgtgctttcaaggcctcctttgaagtgtctgct
aagccttgccgtaaggtgagagagacactggctgctgagactggactgacagtacgagtt
gtgcaggtttggtttcaaaaccagagagccaagatgaaaaagatagcccgtcgacaacag
cagcagcagcagcagcagcaggaacaagagcagctgggaggaaccaggagaggacaaagt
agagggggccgccagagcaatgatgacagtgaggatggatcaagtactcatggcatggat
gggatgctgggatatccctctctgccacgtcagcaactacttgctctggaccccaacatc
tatggtggagagccgtttcgacacgggcttacaccgcctcagctgaacaacgagcagctc
cactcctatgactccgagacagtgttccacgacctggacagcgatggaagcctcggtcac
cttggtgactgcctcttagcaacaggggacggtggcctcctgccagggcgagttggaaac
cccatcgaccgtctctactccatgcagaactcctacttcacctcctga
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