Xanthomonas hydrangeae: LMG31886_36730
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Entry
LMG31886_36730 CDS
T07925
Symbol
rfbC_2
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00521
Streptomycin biosynthesis
xhd00523
Polyketide sugar unit biosynthesis
xhd00541
O-Antigen nucleotide sugar biosynthesis
xhd01100
Metabolic pathways
xhd01110
Biosynthesis of secondary metabolites
xhd01250
Biosynthesis of nucleotide sugars
Module
xhd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LMG31886_36730 (rfbC_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LMG31886_36730 (rfbC_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LMG31886_36730 (rfbC_2)
Enzymes [BR:
xhd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LMG31886_36730 (rfbC_2)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAD7744160
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All DBs
Position
LMG31886:complement(4314663..4315220)
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AA seq
185 aa
AA seq
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MKVIETRLPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGVDWPISDPLLSAKDANAPFLSDVPVDRL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtaatcgaaacgcgtctaccgggttgcgttgtcatcgagccggcagtgttcggc
gatgagcgcgggtatttctttgaaacatggaatgcagagcgctttggccaacacggcctg
ccgacgcaattcgtgcagagcaacgtgtccacctctgccaagggcgtgctgcgtggtctg
cactatcagtggccgcgcccgcaaggtaagttggtcagcgtgctcgaaggcgaggtgtat
gacgtcgctgtcgatgtgcgtcatggttcgccgaatttcggtcaatgggctgcggtggta
ttgagcgcagagaacaagaagcagttctggattccggaaggctttgcgcatggttttgcg
gtgttatccgagcgcgccgttttcagttatctgtgcaccgacgtgtacgttaaggaagcc
gacgctggcgtgcgttgggatgacgcggcgatcggtgtcgattggccgatcagcgaccct
ttgctatccgccaaggatgccaatgcgccgttcctgagcgacgtgccagttgatcgattg
ccggtgtatacgccgtga
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