Xiphophorus hellerii (green swordtail): 116707967
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Entry
116707967 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116707967
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116707967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
SPRY
zf-RING_2
zf-RING_5
U-box
CCDC-167
DAXX_hist_bd
NleE
Motif
Other DBs
NCBI-GeneID:
116707967
NCBI-ProteinID:
XP_032401564
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All DBs
Position
18:12081547..12083250
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AA seq
567 aa
AA seq
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MAQKGVQLDVETFSCSICLNLLNNPVAIPCGHSYCMSCIQSFWGKKGKKKRHCCPQCRQT
FAPRPALVKNTMLAALVEQLKQTGLQADPADPAGPEDVACDMCPGRKLKAIKSCLNCLAS
YCEKHLQSHYSAALLQKHKLVEPSKKLLENICSRHDEVMKVFCRTDQQCICILCTMEEHK
GHETAPAAAERAERQKELEENRQQIQKKIQDQEKELKRLQQEVRDACVSADEAVKSTEKI
FTELINLLQKRRSDAKQRIRSQQEALVLWVKEVQEKLEQEVNDLKRRDAELEQLSHTEDH
NQFLQSYASLPAPSDLPDSSGINAGPLRHFEDVKAAASELRDKLQDILRDAGTNTLQTVS
SSQPEPKSRAEFLKYTCEITLDPNTAFRTLELSKNNKAAIVWYEDESYTPNPERFSSCRQ
VLSRQSLTGRCYFEFKWAGIGIFVAVAYKSIQRGGRANESLFGFNDQSWALRCDIERLSL
KGAGYTFCHNKAETPVSGPQSCKLGVYLDHSAGVLAFYDVSETMTLLHRVQTTFTQPLYA
GLGFFFCDGGNAEFCNLKKQNKSDCTL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaagggtgttcagctggatgttgaaactttttcctgttcaatctgtctgaac
ctactgaacaatccagtggctattccgtgtggccacagctactgcatgagctgcattcaa
agcttctggggtaaaaagggtaagaagaaacgccactgctgccctcagtgcaggcagact
tttgcaccgaggcctgctctggttaaaaacacaatgttagcagctttggtggagcagctg
aagcagactggacttcaggctgatcctgctgatcctgctggacctgaagatgtggcctgt
gacatgtgccctgggaggaagctgaaggccatcaagtcctgtctcaactgtttggcttct
tactgtgaaaaacacctccagtctcactacagcgccgctctgctgcagaaacacaagctg
gtggagccctccaagaagctcctggagaacatctgttctcgtcacgatgaggtgatgaag
gttttctgtcgcaccgatcagcagtgcatctgcatcttgtgcaccatggaagaacacaaa
ggccatgaaacggctccggctgcagctgagagggcggagaggcagaaggagcttgaggag
aatcgacagcaaatccagaagaaaatccaggaccaggagaaggagctgaagaggctccag
caggaggtgagggacgcctgtgtctctgctgatgaagcagtgaagagtacggagaagatc
ttcactgaactgattaatctcctccagaaaagacgctctgatgcgaagcagcggatcaga
tcgcagcaggaagctctggtgctttgggttaaggaggttcaggagaagctggagcaggag
gtcaatgacctgaagaggagagacgctgagctggagcagctttcacacacagaagatcac
aaccagttcctgcaaagctacgcctcgctgccagcgcccagtgacctcccagactcatct
ggcatcaacgccggtcctctgaggcacttcgaggacgtgaaagcagctgcgtccgagctc
cgagacaaactgcaggacatcctgagagacgctgggacaaacaccctccagacggtgtcc
agttcccaaccagagccaaagagcagagctgaattcctgaaatacacctgtgaaatcact
ctggatccaaacacagctttcagaacgctggaactgagcaaaaacaacaaagcagcaata
gtgtggtacgaggacgagtcatacactcctaatccggagagattcagttcatgcagacaa
gtgctgagcaggcagagcctgaccggacgatgctactttgagtttaaatgggctggaata
ggaatttttgtagcagttgcatacaagagcatccagagaggagggagagcaaatgaatcg
ttgtttgggtttaatgatcagtcgtgggcgctacgctgtgacattgagcgtttgagtttg
aaaggagctggttacactttctgccacaacaaagcagagactccagtgtcaggtcctcag
tcatgcaaactaggagtgtacctggatcacagtgcaggtgttctggctttctatgatgtc
tctgaaaccatgactctgctccacagagtccagaccaccttcactcagccgctgtacgct
ggacttggcttttttttctgtgatggaggcaatgcagagttctgcaacctcaagaaacag
aataaatctgattgtacattataa
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