Xiphophorus hellerii (green swordtail): 116710372
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Entry
116710372 CDS
T07363
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116710372 (ap5b1)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116710372 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
116710372
NCBI-ProteinID:
XP_032405285
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All DBs
Position
20:complement(30348207..30353981)
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AA seq
941 aa
AA seq
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MATNWTERISAFCCSPSGFLTETSPDTFLSELLRELRDDRVSYGVKVLLLSPLCEYPTLL
CSSESAGEETALDLMSVFTQCPSRFSQFRCHLLVALTGVLVCSSCVNGHSRAALDFLDLL
LRMARDASDPPGEGTRRLLRATACDCLREMEASCPGLLSQRLELLAGLRQLETSRLHQAF
GVLQILALRNAVYQLTKQAGAGAAHLKALLGGNGSVAWEADQEAVHMDATDAAMLLSLIL
GPMGRVPTLHTGPDCKELRSVLSSLLEESYLLTPLCQAALFHRLTEVVAMVPGIPPAVFR
AQLLRLLGTNEVCLLHVTLLMKCGFTDSLFSAEDEAFLLKRLVVLSQHPLLSSPEKLFYM
DCILHFPENRPISCGDSDEAPPVLLTPQLASVLLPSVFNDSATLLSRLNLQALVFLEEGD
EESRGLAYIYDHLAALLHIVDRGGSRDIVVTFFRAAFLFLFYFHHVERYVTCLSEQLCHL
YLQHTRLAPHILNLVNQTQERLPECKWFVGLLQGLQRVITRVPFGQLPLHDLSSHLKVLD
RVAEEEEICQRSSLSFLSTIVTQTSSSLCTSGDWRLGNGLLGVCRRVLLHPNLDSMLIPL
ADILQHLAFHYGDTDIRDHARLYYTFLTMLSREKLSAVLVKSAAEGGGQVKKRTLSCVMA
ESEGLTNTLTVHQTEKSIFQLTEALPGPHQEAENLQLNQEDEYKTLECYRAQFSKSGFAS
LIVLKYHLTHTEPHDPRFEQLFSIQLHFSLTDDHYEELQDISVPCLFRQGPLPVVQLTLK
PRRPYPTTIHASAIFTSKDGLTWHTAMPDIHVAFQQVFLPLPAPPTWSRASTRDVFECLW
DEMRRETGESCISLFCCQLREAALKALVEKHFHSFLVPDPLEEAAEFRALLFLPPKSHML
LKIGSTEDAAHFNMATDDCRLLPQMNSYLLKVTSSLENSVS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaactggacggagagaattagtgctttctgctgcagtccaagtggcttcctg
acagaaacgagcccggatactttcctgtcagagctgctacgggagctgcgggatgacaga
gtcagctacggagtgaaggtcctcctgttgtctcccctctgtgaatatccaaccctgctg
tgctcctcagaatctgccggcgaggagacagccctggatctcatgtcggtgttcacccag
tgtccgtccaggttcagccagtttcgctgccatctcctcgtggccctcaccggcgtcctc
gtctgctcctcctgtgtgaacggccactcccgggctgcgctggactttctcgacttgctc
cttcggatggctcgggacgccagcgacccccccggcgagggcacacggcgccttctcaga
gcgacggcctgcgactgcctgcgcgagatggaggccagttgtcccggacttctctcccag
cgcctcgagctcttggccgggctgcggcagctggagacctccaggcttcatcaggctttt
ggggtgctgcagattctggcgctgagaaatgctgtttatcagctcactaagcaagcagga
gcaggcgctgcgcatcttaaagctctgctaggaggaaatggctccgttgcgtgggaggca
gaccaggaagccgtccacatggacgccacggatgcggccatgctgttgtccctcatccta
ggaccaatgggcagagtgccgacccttcacactggacctgactgtaaggagctgcggtct
gtcctctcttccctattagaagagtcctacctcctcacgcctttgtgtcaggctgcactt
ttccacagactaaccgaggtggttgccatggtgcccgggatccctccagccgtatttcga
gctcagctcctgcgactgctgggaaccaatgaggtttgcctcctccatgtcaccctgctg
atgaagtgcggcttcaccgacagcctcttcagcgccgaagacgaagccttcctcctgaag
cggctggtagtcctctcccagcacccgctcctgagctcgcccgagaagctcttctacatg
gactgcatcctgcactttccagagaaccgtccaatcagctgcggtgacagcgacgaggcc
cctcctgtgctgctgaccccacagctggcctcggtcctgctaccttcggtgtttaatgac
agcgccaccctgctgagccgactcaacctgcaggctctggtcttcctggaagaaggggac
gaggagagccggggcctggcctacatctacgaccaccttgcggcgctgctgcacatcgtg
gacaggggaggcagcagagatattgttgtgacctttttcagagctgccttcctcttcctg
ttttacttccaccatgtggagcggtacgtaacttgccttagcgagcagctatgccatctc
tacctccaacacacccggctggccccacacatcctcaacctagtcaatcagactcaagag
aggttaccggagtgcaagtggtttgtggggctcctgcagggtctccagagagtgataacc
agggtcccgtttggccagctccccctacatgacctcagcagccaccttaaggtgctggat
cgggtggcagaggaagaagaaatctgtcagcgtagctcccttagctttctgtccactatt
gtcacccaaacttcctcctcgctgtgtaccagtggcgactggcggttgggaaatggtctg
ctgggagtttgccgccgtgtgctcctccatcccaatctggactctatgcttattcctttg
gccgacattctgcagcatcttgccttccactatggcgacacggacatcagggaccacgcc
cgcctctactacacgttcctcacgatgttatctcgggagaagctgtccgcagtgctggtg
aagagtgccgcagagggcggcggtcaagtcaagaagcgaacgctgtcctgcgttatggcg
gagagcgaggggctgactaacaccctgaccgtccaccagaccgagaaatccatatttcag
ctgaccgaagctttacctgggccacatcaagaggcagaaaaccttcagctgaatcaggag
gatgagtacaaaacactggaatgttacagggctcagttcagcaagtctggctttgcttca
cttattgtgttaaagtaccacctgacccacacggagccccatgaccctcgcttcgagcag
cttttcagcatccagctccacttcagcctcacagacgatcactacgaagagctgcaggac
atcagcgtcccctgtctcttcagacagggaccactgcccgtggtgcagctgacactgaag
cccagacggccgtacccaaccaccatccacgcgagcgccatcttcacctctaaggacggg
ctcacctggcacaccgctatgccggacatccacgtggcattccagcaggtcttcctgccg
ctgcccgcacccccaacctggagcagagccagcacacgagacgtctttgagtgcctgtgg
gatgaaatgcgccgtgagacgggagagtcttgtatcagtctgttctgctgccagctgcgg
gaggccgctctgaaagctctggtggagaaacacttccattccttccttgtgccagacccg
ttggaggaggcagccgagttcagggcgctcctgtttctcccaccaaagtctcacatgctg
cttaagatcggctctacggaggacgccgcgcacttcaacatggccaccgatgactgtcgg
ctgcttcctcagatgaactcatacctgctgaaagtcacttcttcactagagaattctgtc
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