Xiphophorus hellerii (green swordtail): 116711224
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Entry
116711224 CDS
T07363
Symbol
cacna2d2
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-2
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04260
Cardiac muscle contraction
xhe04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116711224 (cacna2d2)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116711224 (cacna2d2)
04261 Adrenergic signaling in cardiomyocytes
116711224 (cacna2d2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116711224 (cacna2d2)
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116711224 (cacna2d2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
vWA-TerF-like
DASH_Spc19
dCache_2
Motif
Other DBs
NCBI-GeneID:
116711224
NCBI-ProteinID:
XP_032406528
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All DBs
Position
20:14579840..14803312
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AA seq
1112 aa
AA seq
DB search
MAICAQSIGVFCLFAVQTVLIICVSTPTAGTHHFPQHYTMIHWAGRIEKELEKVLQHVTG
AQQMRSIYNEKKSQFEIKRNNPKDLVERVARDISKLLNSKSKALEKLVREAEQLQKEHVW
KDGVTENAISYYDSKADSDYTEDGEEEAPLETSSSLELEFVDDPNFKNKVNYSSSAVQIP
TDIYKGSPVILNELNWTQALERVFIENRREDSSLRWQVFGSATGVTRYYPATPWRAPNKI
DLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVMEMLDTLSDDDYVNVAK
FNEKAEAVVPCFRTLVQANVRNKKIFKEAVKHMQAKGTTDYKSGFTFAFEQLLNESSAPR
ANCNKMIMMFTDGGEDRAQEIFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYY
FEIPSIGAIRINTQEYLDVLGRPMVLAGPKGKQVQWTNVYQDALGLGLVITGTMPVFNLT
ADSASSQNQLILGVMGVDVAINEIKKKTPTYRLGANGYTFATDPNGYVLLHPNLRPKIIN
FREPVTLDFLDAELEDNNKEEIRRQMIDGKSGQRKIKTLIKSVDERYIDEAMRTYTWTPV
EGTNYSLGLVLPTYSENHVKANLSDQILQVQFSYIKDFESLLPNSFESEGHVFIAPREYC
NDLELSNNNTEFLLNFIALMEKVTPDSKQCDSLLLHNLILDTGIIRQLVDKVWKNKDLNT
YGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFTAPYRSAGADL
LNPENDTVGILVSTALDITVGGKTVKPAVLGVKLDLEAWTDKFKILASNHTDSRQGSNTC
GPNRGCEMDCEANSDDLLCYLIDDGGFLIMSNQKDDWSEVGKFLGVVDPNLMYALYNNSF
YKRKQSFDYQSVCERVQNSEAGAARRGVFVPTIADFVNLAWWTSAAAWSLFQQLLYGLAY
HSWFVTDEVEAEVIESKERSCVMIQTQYYFSNLSNSYNILQDCGNCSRLIHAKRINNTNL
LFVVAEKLPCSSCEIEDLSQDKEEFKEENPCEEMTTARYRKGPSTCFDSNAAENTSDCGR
GHSFRPPLYTLLLIQLLLLYSALSPHHHSLLH
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgcgcagtcgatcggcgttttctgcctcttcgccgtacaaactgtactt
attatatgcgtctccacaccgacagccgggacccaccacttcccacagcactacacaatg
attcactgggccggacgcattgagaaggagctggaaaaggttcttcagcacgttaccgga
gctcagcagatgagatcgatttataatgagaagaagagccagtttgaaatcaagagaaac
aaccccaaggatctggtggagcgagtggcgcgggacatctctaagctgctaaacagcaag
agcaaagccttagagaaactggtccgagaggccgagcagctgcagaaggagcatgtgtgg
aaagacggcgtgacggagaatgccatttcatactacgattcgaaagcggattcagactat
acagaagacggagaggaggaagctccgctggagacctcgtcctccctggagctggagttt
gtcgacgatccaaattttaaaaacaaggtcaactactcctccagtgccgtccagattccc
acagatatatacaaaggctcgcctgtgatcctgaatgagctcaactggacacaggctctg
gagcgagtcttcatcgaaaaccggcgagaggacagctctctgcgctggcaggtgttcggc
agcgccacgggcgtgacgcggtactacccagccactccttggagggcgcccaacaagatc
gacctttacgacgttcgcagaaggccatggtatatccaaggtgcatcgtctccaaaggac
atggtcatcattgtagatgtgagcggcagtgtcagcggactcactctaaagctcatgaaa
acctccgtcatggagatgcttgacacgctatcagacgatgactatgtcaatgtggcgaag
tttaacgaaaaggcagaggctgtcgtcccgtgcttcaggactttggtccaagccaacgtc
cgcaacaagaagatcttcaaggaagctgtcaagcatatgcaggccaaaggaaccacagat
tacaaatcaggcttcacgtttgccttcgagcaacttctcaatgagagcagtgccccgagg
gccaactgcaataagatgataatgatgtttacagatggcggtgaagatcgtgctcaggaa
atctttgagaagtataactggcccaacaaaactgttcgagttttcaccttctctgttggg
cagcataactatgatgtcacccctttgcagtggatagcatgtgctaataaaggttactac
tttgaaataccatcaattggagccatcagaatcaacacacaggaatacctggatgttctg
ggacgtcccatggtgctggctgggcctaaaggtaaacaggtgcagtggaccaatgtctac
caggatgctctgggtttggggcttgtcatcacaggaacgatgccagttttcaacctcact
gcagatagcgctagctctcagaatcagctcatccttggggttatgggagtagatgttgca
attaatgaaatcaagaagaagactccaacatacagacttggggccaatggctacacattt
gctactgacccaaacggttacgtgctgctgcatcctaacctaagacccaagatcattaac
ttcagggagcctgtcactctggactttctggacgcagaactagaagataacaacaaggag
gagatccgccgacagatgattgatggcaaatcggggcaaagaaaaatcaagacgctcatt
aagtcagttgatgagagatacatcgacgaagccatgcgaacgtacacatggacgcccgta
gaaggtacaaactacagtttagggttggtactgcccacatatagtgagaaccatgtcaag
gccaacctaagtgaccagatccttcaggtgcagttctcatacatcaaggattttgaatct
ctgctgccaaacagttttgagtctgaaggacatgtattcattgctcccagggagtactgc
aatgatctcgaactttccaacaacaacaccgagttcctgctcaacttcattgccctgatg
gagaaggtgactccagactccaagcaatgtgacagtttgctccttcacaatctgattctt
gacactggcatcatccggcagctggtcgataaagtgtggaagaataaagacttaaataca
tacggcttcctggctgtgtttgctgcaacagatggaggcataacaagagtctttccaaac
aaagctgcagaaacctgggaggaagacccagagccgtttaatgccagctactaccgccgt
agccttgacaacaagggttacatcttcacagcaccgtatcgatcagctggggccgatctg
ttgaacccagaaaacgacacagtgggaattttggtcagcacggctctggatatcacagta
ggcgggaagacggtcaaacctgcagttcttggagtaaagttagacctggaagcatggacc
gataaattcaagattcttgccagcaaccatacggacagccgtcaaggctcaaatacgtgt
ggaccaaacagaggttgtgagatggactgtgaagctaatagtgatgatctcctgtgctac
ttaattgatgacggcggtttcctaatcatgtcaaatcagaaggatgactggagcgaggtg
ggcaaatttcttggtgtcgttgacccaaacttgatgtacgctctgtacaacaattccttt
tacaagcgcaagcagtcgtttgattatcagtctgtgtgtgaacgagtccaaaacagtgaa
gctggagcagcaaggcgaggagtgtttgtgcctacgattgcagactttgttaacctggca
tggtggacgtcagctgctgcatggtccttgttccaacagcttttatacggtttggcttat
cacagctggtttgtcacagatgaggtggaagcggaagtaatagagtcaaaagagaggagc
tgcgtgatgatccaaacccagtactacttcagtaacctcagcaactcctacaacatcctc
caagactgcggaaactgttccaggctgattcatgccaaaaggataaacaacaccaacttg
ctgtttgtggtagcagaaaagctgccatgcagctcctgcgagatagaagatctttcccag
gacaaggaggaattcaaggaggaaaatccgtgtgaagaaatgacgaccgcacggtatcga
aaaggaccttccacctgcttcgacagcaacgcagctgagaacacgtcagactgtggaaga
ggtcactccttccgtccgcctctctacaccctcctgctcattcagctgctgctgctttat
tcagctctcagcccccatcatcactctctgttacattaa
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