Xiphophorus hellerii (green swordtail): 116712125
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Entry
116712125 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116712125
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116712125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
MRP-S31
Taxilin
Gp58
Motif
Other DBs
NCBI-GeneID:
116712125
NCBI-ProteinID:
XP_032407886
LinkDB
All DBs
Position
21:complement(24699159..24701332)
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AA seq
553 aa
AA seq
DB search
MEQNQLDRETFSCPICLDLLNDPVTIPCGHSYCMSCIKTHWDEEDQRRIHSCPQCRETFI
PRPVLKKNTMFAALVEQLKKTEHQAAPADPRYAGPEDVVCDSCTGRKLKARMSCLVCLAS
YCEKHLQPHYDSAAFRKHKLVEPSNNLQEKICSKHDKLLEIFCRTDQKCICYLCTMDEHK
GHETVSAAAERTERQKKLQERRGNIQQRIQDKEKDVKLLQQEVEAINHSADKTVEDSEKI
FTELIRLLQKRSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDH
SQFLLNYPSLPALSESTHSSSINIRPLRHFEDVAAAVSELREKLQDVLRDSWTNISLMVT
EVDVLLSGPEPKSRAGFLKYSCQITLDPNTVHTQLALSEGNRKVMRMNQPQLYSAHPDRF
TNYSQVLSRESLTGRCYWEVKWTGSVCVAVAYKNISRAGGELECRFGRNDKSWALDCQQK
GLEFVHKSIWTSISGPVSSRLGLYLDHGAGLLSFYSVSETMTLIHRVQTRFTQPLHAGVG
IGLGSSAEFSKPN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctggacagagaaactttctcctgtccgatctgtctggatctactg
aacgatccagtgacgattccctgtggacacagctactgcatgagctgtatcaaaacccac
tgggatgaagaggatcagaggagaatccacagctgccctcagtgcagggagacgttcata
ccaagacctgttttgaagaaaaacacaatgtttgcagctttagtggagcaattaaaaaag
actgaacaccaagctgctcctgctgatccccgctatgctggacctgaagatgtggtttgt
gattcctgcactggaagaaaactgaaagccaggatgtcctgtttagtctgtctggcctct
tattgtgagaaacaccttcagcctcattatgattcagctgcatttcgaaaacacaagctg
gtggagccgtccaacaacctccaggagaaaatctgctctaagcatgataagttgttggag
atcttctgccgcactgatcagaagtgtatctgttacctctgcactatggatgaacataaa
ggccatgagacagtctccgctgcagcagaacgaactgagaggcagaagaaactccaggag
agacgaggaaacatccagcagagaatccaggacaaagagaaagatgtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgagaagatc
ttcactgaactgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggag
atcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcac
agccagtttctcctcaactacccctcactgccagcactcagtgagtctacacactcatcc
agcatcaacatccgtcctctgagacactttgaggacgtggcagcagctgtgtcagagctc
agagagaaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcact
gaggtggatgttctactgtcaggaccagaaccaaagagcagagctggattcttaaagtat
tcatgtcaaatcacactggacccaaacacagtacacacacagctggccctgtcagagggg
aacaggaaggtgatgaggatgaatcaacctcagctttattctgctcatccagacagattc
actaattattctcaggttctgagcagagagagtctgactggacggtgttactgggaggtg
aagtggaccgggtcggtttgtgttgctgtcgcatacaagaacatcagcagagcaggaggt
gagcttgaatgtagatttggacgcaatgacaaatcttgggcattagattgtcaacaaaaa
ggtcttgaatttgttcacaaaagcatctggacctccatctcgggtccagtttcctccaga
ctgggactgtacctggaccacggagcaggtcttctgtccttctacagcgtctcagaaacc
atgactctgattcacagagtccagaccaggttcactcagccgcttcacgctggggttggg
attggtttaggaagctctgcagagttcagtaaacccaactag
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integrated database retrieval system
